Neurospora tetrasperma: NEUTE1DRAFT119845
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Entry
NEUTE1DRAFT119845 CDS
T03451
Symbol
NEUTE1DRAFT_119845
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NEUTE1DRAFT119845 (NEUTE1DRAFT_119845)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT119845 (NEUTE1DRAFT_119845)
Enzymes [BR:
nte01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NEUTE1DRAFT119845 (NEUTE1DRAFT_119845)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NEUTE1DRAFT119845 (NEUTE1DRAFT_119845)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
PNKP_ligase
Motif
Other DBs
NCBI-GeneID:
20823877
NCBI-ProteinID:
XP_009847938
JGI:
Neute_matA2_119845
UniProt:
F8MDX9
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MPFLFSYVCDLLQALDDNQRTKSGLKTTAKIIEDWFAKHRSLINRDDHNDTALLSTLFPE
KRTDRVFRYGPGRLERIIGRGLVLGMTRREELGRHADAQWGMDLAECVERILRDTPNPDP
IRPVTVEEIDNLLHDIASHCHFSSPAVRSSPPSSTSVSREKALGDIYTRFSPRDAKWFTR
LFLKNYRPVILGPQLVYRNYHPRLPLIVKVRDDFVDAGRILASHRQERTVTGRDEFAKHL
KPRLGVKVGRQPWFQARSIKHCLQMDYGRMSCEVKYDGEYCQVHIDLSKGYDCIQIFSKS
GKDSTQDRKALHEWEEKILDFYKIRKHVSRSGAFLSTEQDSQRNPWEHLMIVYYDILLVD
DESLLAVKHSERMQRLQEIVTEVKGRSMLVQRQIIDCSRPSAESDLRRAFATCITNRGEG
LVLKPDATYFNFGTSVGYSGSIAIKLKKEYIRQFGDVGDFAVVGARYDPTKAKSFGFPNI
KWTHFYIACLGNKEEVVRFGAVPNFVVTNVVQLNETQMRAFMTAIQPVAVDPKDDTAFSL
RIEDGVDGKKAPTTLFKVPPVFDIRCFSFDRPGNTGFWTPRFPMVNKIHCDRTYLDVLSF
SELQEMAIHGTQKPLGEESQELLEWIGRLEQADPKTRGVEIQTQTTASTSQAPSTPNKSS
CPDALPPSSLSSSLKCRSVGRDSFTSSASVAIAIRSPIKTKDRPRLLPTVVESPQRSTNE
LSTMARGEKRPHSSSTDLECDISKIRKHNNPEGQNDVSTSRRETISSSVVQREPLMAIET
TSPRRNPNPRLAAPPRLIGANSMYQPTTLDIEHRRSTNTRGRVSLPHSMSLGITSCDFTF
TVPQPTARPHVSSPPTAIESLTENKCRYLGDACTIANISFMLSPCIADYLWVTEDLLGYH
GITKFARDPKEWAAEQSIAPTGTPTIMPTITATTATEAMVLNSSAPTPTPSCTPGGTKRK
KKIILVDRRRKEANKVFLQSVRNAGLRHRNGEPRHVSVYDWRVLEELKEEEEKCRESGEW
DRVRFDIRRSGSIWRKYWVGLT
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccttttctcgtacgtgtgcgacctcctgcaggcgttagacgacaaccaacgc
acaaagtctggcctgaagactactgccaaaatcatcgaggactggttcgccaaacaccgc
tcacttatcaaccgcgacgaccacaacgatacagcactcctttccactctgtttcccgaa
aaaagaaccgacagggtcttcaggtatggcccgggaaggttggaacgcatcatcggaagg
ggactggtactgggaatgacccgaagggaagaacttgggagacatgcagacgctcaatgg
ggcatggatctcgccgaatgtgttgaacgtattctgagggacacgcccaatcctgatccc
atcagaccagttaccgttgaggagatcgacaaccttcttcacgacatcgcttcgcactgt
cactttagctcccctgcagtgcgcagctcacctcccagttcaacctctgtaagccgagag
aaggcacttggagatatctatacgagattctcccctcgagatgccaagtggttcacgcga
ctattcttgaagaactaccggcccgtcattctcggcccgcaactcgtatatcgcaattac
catcctcggttgcccttgatagtcaaagtgcgggatgactttgtggatgctggccgcata
ctggcgagccacagacaggaacgaacggttactgggagggacgaatttgccaaacacctg
aaacccagattgggtgtcaaagttggccgtcaaccatggttccaggcaagaagcatcaag
cattgcttgcagatggactacggtaggatgagctgcgaggtgaagtacgacggcgagtat
tgccaggttcatatcgacctcagtaagggctacgactgtatacaaatattctccaagagt
ggaaaggatagcacacaagaccggaaagctctacatgagtgggaagaaaaaatattggac
ttctacaaaatccgaaagcatgtatccaggtctggtgcgttccttagcacggaacaggac
tcacaacgaaacccttgggaacatctgatgatcgtttactatgacattctccttgttgat
gacgagtcgctcttggctgttaaacactcggagagaatgcagcgtctccaagaaatagtg
acagaggtcaaaggacgctcgatgttggtccagcggcagatcatcgactgcagccgacca
tccgcggaatcagatctacggcgtgcgtttgcgacgtgcatcaccaaccgtggagaaggc
ctggtactcaaacccgacgctacatacttcaactttggtacgtcggtggggtactctggc
agcatagcaattaaactcaagaaggagtatattcgacagtttggggatgtgggtgatttt
gctgtggtcggtgctcgttacgacccgaccaaagcaaagtccttcggctttccaaacatc
aagtggacacacttttacattgcgtgtctgggcaataaggaagaggtggtgcgcttcgga
gcagtgcccaatttcgttgttacaaacgtggtgcaactgaacgaaacgcaaatgcgtgct
tttatgacggccattcaaccagtcgccgtggatccgaaagacgatactgcattttcgttg
aggatcgaggacggggtcgacggcaaaaaggcaccaacaacactcttcaaagtaccccca
gtgttcgacataaggtgtttctctttcgacagacccggcaatactggattctggaccccg
aggttcccgatggtaaacaagatacactgtgacagaacttatcttgacgttctgtctttt
tcagagttacaagaaatggcaattcatgggacacaaaagcccctaggtgaagaaagccag
gagctgttggagtggatcggacgtctggaacaggctgatcccaaaacaagaggcgtcgag
atccagacccaaaccaccgcctcaacaagccaagccccgtcgacacctaacaagtcgtca
tgcccagacgctctaccaccttcgtctctatcctcctccctcaaatgtcgctcagttggc
agggactcgttcacatcgtcagcttcggtggccatcgctatcagatcaccgataaagacc
aaagatcgacctcgtcttctgcccacagtggttgaatctccgcagaggtcaactaacgaa
ctttcaacgatggctagaggggaaaagcgacctcatagttcatccaccgacctagaatgt
gacattagcaagatcagaaaacacaacaacccagaaggccagaatgacgtttccacatcc
cgaagggagaccatatcctcatcagttgttcagcgagagcctctcatggccatcgagact
acctcgccacgacgcaatcccaatcctcgcttggccgctcctcctagactcataggcgcg
aactccatgtaccagcccactaccctagacatagagcaccgccggagtacgaatacccgg
ggacgggtttctcttcctcactcgatgtcattgggcattacctcttgtgactttacgttc
actgtaccccaacctacagccaggcctcacgttagctctccccccaccgcaatcgaatca
ctgacagaaaacaagtgccgctacctcggcgatgcatgcacaattgccaatatctccttc
atgctctccccctgcatcgccgactacctctgggtgacagaggacttgctcggttaccac
gggattaccaagtttgcacgcgatcccaaggagtgggcagcggagcaatccattgccccc
acgggcacgcccaccataatgcccacaataacggcaacaaccgccacggaagccatggtc
ctcaacagctcagcaccgacacccaccccctcatgtacccctggtgggaccaagcggaag
aaaaagatcatactcgtggaccgcagaagaaaggaggccaacaaggtgtttctccagagc
gttaggaatgcaggcttaagacatcgaaacggcgagccgagacatgtctcggtgtatgat
tggagggttttggaggagttgaaggaggaggaagagaagtgtagggagagtggcgagtgg
gatagggttagattcgatatcaggaggagtgggagtatttggagaaagtactgggttggg
ttgacttga
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integrated database retrieval system
