Neurospora tetrasperma: NEUTE1DRAFT142911
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Entry
NEUTE1DRAFT142911 CDS
T03451
Symbol
NEUTE1DRAFT_142911
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nte
Neurospora tetrasperma
Pathway
nte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NEUTE1DRAFT142911 (NEUTE1DRAFT_142911)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nte03041
]
NEUTE1DRAFT142911 (NEUTE1DRAFT_142911)
Spliceosome [BR:
nte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NEUTE1DRAFT142911 (NEUTE1DRAFT_142911)
Complex C
U5 SnRNP specific factors
NEUTE1DRAFT142911 (NEUTE1DRAFT_142911)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Motif
Other DBs
NCBI-GeneID:
20826306
NCBI-ProteinID:
XP_009856717
JGI:
Neute_matA2_142911
UniProt:
F8N161
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MDDDLYDEFGNFIGDAEASEEESEHGVDAGNYVYDDYPEEAPEAPAQEMMEVDDEGPSNA
VVLHEDKQYYPTAAQVYGEGVELLVQEEDAQPLTQPIIAPVEQKKFSIEEADLPPVYFDR
TFMADLMNFPEQIRNVAFAGHLHHGKTAFMDMLVLETHDIADRLEKRTGKKRDEQLRYTD
IHILERERGLSIKASPMSLVLQGTKGKSHLFNMIDTPGHVDFVDEVAASLRLVDGVCLVV
DVVEGVQVNTEQIIKHAVLENIPLALIVNKMDRLILELKLPPNDAYYKLKHVIEEVNTVI
ENTIPGRGEERRLSPERGNVLFACTSMGWCFTLQSFAKMYSDTYGGVNSEEFARRLWGDI
YFNPQKRSFTRKPIEEGAKRSFVNFIMEPIYKLYSHTISESPEELKGTLKKLGIQLKPSQ
YKTDPKVLLKLVCEQFFGPSTGFVDMVCQHIPSPAEAAKQKLEQYYTGPLDSKVAESMLN
CDQNGPLVLYVSKLFSAPDAKSFYSFGRVMSGIARPGTEVRVLGEGYSIDDEEDMAMARI
SDVFIAETRYNIPTDGVPAGNWVLLGGVDNSIVKTATIVEKKFEDDEDAYIFKPISHFTQ
SVVKVAVEPINPSELPKMLDGIRKINKSYPLITTKVEESGEHIILGTGELYMDCVLHDLR
RLYADMEIRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMVAEPLEDGIAQDIESGAV
RIRDPVRKIAKFFEEKYGWDLLAARSIWAFGPDEMGPNILQDDTLPSEVDKKRLNTVKDF
IRQGFNWAVREGPLCEEPIRNTKFRLIDVSLAQEAIFRGGGQIIPTSRRACYSSFLMASP
RLMEPMYSVSMTGPQDAVSTVYNILARRRGHVLSDGPIAGTPLYRVNGLLPVIDSFGFET
DLRINTPGQAMVSLVFDRWNIVPGDPLDKEIVLRPLQMANAQATARDFVLKTRRRKGLSE
DVSVAKFLEPEFYQSLIESGTLGEA
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatttgtacgacgagttcggaaacttcatcggtgatgctgaagcctccgag
gaagagtccgaacacggtgtcgacgctggaaactacgtttacgatgattacccagaggaa
gccccagaagctccggcgcaggagatgatggaagttgacgatgaaggaccctccaacgcc
gttgttctccatgaagacaagcagtactacccgacagccgcacaggtctatggcgagggc
gtcgaacttttggttcaagaggaggatgcgcaaccgttaacacagccgatcatcgcccct
gtcgagcaaaaaaagttcagcatcgaagaagcagacctacctcccgtatactttgaccgc
acgttcatggccgatcttatgaacttccccgaacaaatccgtaacgtggcttttgctgga
catctacaccacggaaagacagcattcatggatatgttggtgttagagacgcatgacatt
gcggacagacttgagaagcgaacgggaaagaagcgcgacgagcagctgcggtacacagac
attcacatcctcgagcgggaacgaggattatccatcaaggcttcgcccatgagcctggtc
ctccaaggaacaaaaggaaaatcacatctcttcaacatgatcgatacgccaggtcatgtg
gactttgttgacgaagttgcggcttcgctcaggcttgtggatggtgtctgtttggtggtc
gatgttgtggagggggttcaggtcaacacagaacagatcatcaagcacgccgttttggag
aacatcccactcgccctcattgtcaacaagatggaccggttaattctcgagctcaagttg
ccgccaaacgatgcctattacaaactcaagcatgtgatcgaagaagtcaacactgtcatt
gagaacacaattccaggccgaggtgaagagaggaggttaagtccagagagaggaaatgtt
ctgtttgcctgcacgtccatgggctggtgtttcactcttcagtcattcgccaagatgtac
tcggacacgtatggtggtgtcaactcggaagagtttgcgaggcgcctctggggagacatc
tactttaacccgcaaaagcgaagtttcacaaggaaacctatcgaagaaggggctaagagg
tcctttgtcaacttcatcatggagccgatttacaagttgtactcgcatacgattagcgaa
agtccggaagaactgaagggtaccttgaaaaagttgggcattcagctcaagccatcgcag
tacaagactgaccccaaggtcttgttgaaattggtttgcgagcagttctttgggccatct
accgggttcgtagacatggtctgtcagcatatcccatcgccggctgaggctgcaaagcaa
aagctcgaacagtactacacaggccctctggacagcaaggttgctgagtctatgctgaac
tgcgaccaaaatggcccgcttgtgttgtatgtgtccaagctgttcagtgctcccgatgcg
aagagcttctattcgtttggccgtgtgatgagcggtattgcgcgccctggcacagaggtc
cgcgtgcttggcgagggttattctatcgacgacgaagaagatatggccatggcgaggata
tccgatgtcttcatcgccgaaacacgatacaacatcccgaccgacggcgtgcccgctggt
aactgggttctcttgggtggcgttgacaactcgatcgtgaagactgccactattgtggag
aagaaatttgaggatgatgaggatgcctacatcttcaagcctatttcgcacttcacccag
tccgtcgttaaggttgctgtcgagcccatcaacccgtctgaattacccaagatgcttgac
ggcatcaggaaaatcaacaagagctaccccctcattaccaccaaggtggaggaatcggga
gagcatattattcttggtactggcgagctatacatggactgcgtgttgcatgacctacgt
cgtctatatgccgatatggagatcagggtatcggatcctgtggttcgattctgcgagacg
gtacaggacatgtccgcaaccaaatgctacgccattacccccaataagaagaacaccatt
acaatggtggcggagccattggaggatggcatcgcgcaggacatcgagtccggagcggtc
aggattcgggatcctgtacgaaagatcgccaaatttttcgaggagaagtatggctgggat
ctcctcgcagccaggagtatctgggctttcggtccagacgagatgggacccaacatcttg
caggatgacaccctaccatcagaggttgacaaaaagcgacttaatactgtcaaggatttc
attcgccaaggcttcaactgggcagtccgggaaggcccgctttgcgaagagccaatacgc
aacaccaagttccgactcattgacgtgtcgcttgcccaggaggccatcttccggggcggt
ggtcagatcatccccacgtcccgccgcgcctgctacagttccttcttgatggcctcgcct
cgcctgatggagcccatgtactcggtttccatgaccggtcctcaagatgccgtcagcaca
gtctacaacatcctggcccgccgtcgcggccacgtcctgtccgatggccccattgccggc
accccgctctaccgcgtcaacggcctgctgcccgtcatcgacagtttcggcttcgagacc
gatctgaggatcaacacgcccggccaggccatggtcagtctagttttcgacaggtggaac
attgttcccggtgatccgctggacaaggagatcgtcttgcgtccgctgcaaatggctaac
gcgcaggcgacggcgagagacttcgtgctcaagacgaggcggcgcaagggcttgagcgag
gatgtcagcgtggccaagtttctggagcccgagttttaccagagcttgatagagagcggc
accctgggtgaggcgtga
DBGET
integrated database retrieval system
