Nitrospira tepida: DNFV4_00194
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Entry
DNFV4_00194 CDS
T09383
Name
(GenBank) Efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nti
Nitrospira tepida
Pathway
nti01501
beta-Lactam resistance
nti01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DNFV4_00194
01503 Cationic antimicrobial peptide (CAMP) resistance
DNFV4_00194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nti03036
]
DNFV4_00194
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nti02000
]
DNFV4_00194
01504 Antimicrobial resistance genes [BR:
nti01504
]
DNFV4_00194
Chromosome and associated proteins [BR:
nti03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DNFV4_00194
Transporters [BR:
nti02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DNFV4_00194
Antimicrobial resistance genes [BR:
nti01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DNFV4_00194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
CAI4029776
UniProt:
A0AA86MVI5
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All DBs
Position
NsDNF:175362..176618
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AA seq
418 aa
AA seq
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MGKAVHQLIHVGALALSLGAGLAACKQEAASLPAPGPPEVQVTTVTTQSLAEEPEFVGQS
ESSRPVEIRSQVTGIIKERFFKEGRSVKQGAKLYRIDPVPFEAAVVTAKATVAQAEARLV
QAKQNLARVKPLLAEQAVSQKDVDDAVAEELAAKAALEAAKGQLVKAKFDLDNTLITAPI
SGMIERTRVYEGRLVSAQTDLLTVIHQIDPMYVTASLPETFILQQRRELAAGQVEQPDQY
RLKAVITFADGSTYPQEGVLDLLDVGLRTETGARDARFIFSNPSGALLPGQFVKVRVKGY
TRPAAILVPQRAVQQGPKGPIVFVVGEGDKVEIRPVQATSWQGSQWLVEEGIKSGERVIV
EGVHRVQPGAPVKPIPIDRPAGGADEGVEPAPASGRPSDSPANRSGEPPPDAKAEQTS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggcggttcaccagttgatccacgtaggggccttggcgttaagcctcggggcc
gggctggcggcttgcaaacaggaggcggcctcgttgcccgcccccggtccgcctgaggtt
caggtgacgacggtgacgacccagtcgctggccgaggagccggagttcgtggggcagtcg
gagtcctcccgtccggtcgagatccgttcccaggtcacggggatcatcaaggagcggttc
ttcaaggagggccggagcgtcaagcagggcgccaagctgtaccgcatcgatcccgtgccg
ttcgaagccgcagtcgtcacggccaaggccacggtcgcgcaggcggaggcgcgcttggtg
caggccaagcagaacctcgcccgcgtcaagccgctgttggcggagcaggctgtgagccag
aaggacgtggacgatgcggtggcggaggagttggcggccaaggcggcgctggaggcggcc
aaggggcagttggtcaaggccaagttcgatctggacaacacgctcatcaccgccccgatc
agcgggatgatcgagcggaccagagtctatgaaggccggctcgtgtcggcccagaccgac
ttgttgaccgtcattcaccagatcgatccgatgtatgtgacggcgagtctgccggaaacc
tttatcctgcaacagcgccgcgagttggccgccgggcaggtggagcagccggaccaatac
cggctcaaggccgtcattaccttcgccgacggctcgacctatccgcaggaaggggtgctg
gatctgctggacgttggcctgcggaccgaaaccggcgcccgcgacgcgcgattcatcttc
tccaatccgagcggcgccctgctccccggacagttcgtcaaggtgcgggtcaaggggtac
acgagaccggcggccattctggttccgcagcgggcggtgcagcaggggccgaagggcccc
atcgtcttcgtcgtcggagagggagacaaggtggagattcgcccggtccaggcgaccagt
tggcaaggcagccagtggctggttgaagaggggatcaagagcggcgagcgggtgatcgtc
gaaggcgtgcaccgcgtgcagcccggcgcgccggtgaagccgattccgatcgatcggccc
gcaggaggggccgacgaaggcgtcgagccggcgccggcgtccggccggccatcggactcg
cctgcaaaccgatccggcgagcccccgcccgatgcgaaggcggagcagacctcatga
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