Nitrospira tepida: DNFV4_01025
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Entry
DNFV4_01025 CDS
T09383
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nti
Nitrospira tepida
Pathway
nti00300
Lysine biosynthesis
nti00550
Peptidoglycan biosynthesis
nti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DNFV4_01025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DNFV4_01025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
DNFV4_01025
Enzymes [BR:
nti01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DNFV4_01025
Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
Precursor biosynthesis
Amino acid ligase
DNFV4_01025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
CAI4030597
UniProt:
A0AA86MX30
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All DBs
Position
NsDNF:1037638..1039146
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AA seq
502 aa
AA seq
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MQVTLADMLDSPVIRSEILEQRGDLALSVTGITDDSRQVKPGALFVAVKGERVDGHQFLP
QVLQAGAAALVVQQPQAQGTVPVILVKDSRRTLGLLGSRFYGDPSSRLRMVGVTGTNGKT
TITYLTKAVLESAERKVGLIGTVAYQIGEELVPAAHTTPGALEFQALLSRMVSAGMDTAV
MEVSSHALALDRTVGCEYDVAVFTNLTQDHLDFHRDMDDYFSAKLKLFTGLAEGKRKPSK
RAIVNLDDPWSERIRKATAVPLWTYGIKGAADLRAEDLRLSASGTTFSVATPHGRAKVES
RLVGEHNVYNALAAVGVGLQEGLSLDLVCQGIASVRNVPGRFERVEAGQPFTVVVDYAHT
EDALVRLLSAAQALRPGRIITVFGCGGDRDRTKRPKMGRAAVERSDVVVLTSDNPRTEQP
QAILQEVEVGVKDALRHRPQVRCHVIADRRAAIKAAVREARPGDMVVIAGKGHEDYQIIG
TTKHHFDDREVAREAILSLQSV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgaccttggccgacatgctcgactcgccggtcatccgatcggaaatcctagaa
cagcggggcgaccttgccctgtccgtgaccgggattaccgacgattcacgccaagtgaag
ccgggggcactattcgtcgccgtcaaaggcgagcgggtggacggccatcagttccttccg
caggtccttcaggcgggagccgcagccctggtcgtccaacaaccgcaggcgcaggggact
gttccagtcatcctggtcaaggactcgcgcaggacattagggctcctcggcagccgcttc
tacggcgatccttcgtcacgccttcggatggtgggcgtgaccggcaccaacgggaagacg
acgattacctatttgacgaaagccgttctcgaatcggccgaacgaaaggtcggattgatc
ggaaccgtggcctatcagatcggcgaggagctggtgccggccgctcatacgacgccgggc
gccctcgagttccaggcgttgttgagccggatggtctcggccggcatggatacagccgtg
atggaagtctcttcgcatgcgctggcgctggatcggacggtcggctgcgaatatgacgtg
gcggtcttcaccaacctcacgcaggaccatctcgactttcaccgggacatggacgactac
ttttcggccaagctcaagctctttaccggactcgccgaggggaagcgaaaaccgtccaag
cgggcgatcgtcaacctggacgatccctggagcgagcgcatccggaaagcaaccgccgtc
ccgctctggacctacgggatcaagggggcggccgatctccgcgcggaggacctgaggctc
tcggcatcggggacgaccttttccgtcgcgaccccgcacgggcgggccaaggtggaaagc
cggctggtcggcgagcacaatgtgtataacgcgctggccgcagtgggggtcggtttgcag
gaagggttgtcgctggatttggtctgccaagggatcgcctccgtccgcaacgtgccgggg
cgattcgagcgggtcgaggcgggccagccgtttaccgtcgtcgtggattatgcccacacc
gaagatgcgttggtgcggctgttgtccgccgcgcaggcgctcaggcctggacgcatcatc
acggtcttcggctgcgggggcgatcgggatcggacgaagcgccccaagatgggacgggcg
gcggtggagcgcagcgatgtggtcgtgctgacctccgacaaccctcgaaccgaacagccg
caggccatcctgcaggaggtggaggtcggcgtgaaggacgcgctccgtcatcggcctcag
gtgcggtgccacgtgatcgccgaccgtcgcgcagccatcaaggccgcggtgcgggaggcg
cgtccgggcgacatggtggtgatcgccggcaaggggcacgaagactatcagatcatcggc
acgaccaagcaccactttgacgaccgcgaggtggcccgggaggccatcctcagcctgcaa
tccgtgtga
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