Nitrospira tepida: DNFV4_02362 Help Entry DNFV4_02362       CDS       T09383                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism nti  Nitrospira tepida Pathway nti03030   DNA replication nti03410   Base excision repair nti03420   Nucleotide excision repair nti03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nti00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DNFV4_02362    03410 Base excision repair     DNFV4_02362    03420 Nucleotide excision repair     DNFV4_02362    03430 Mismatch repair     DNFV4_02362  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nti03032]     DNFV4_02362    03400 DNA repair and recombination proteins [BR:nti03400]     DNFV4_02362 Enzymes [BR:nti01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DNFV4_02362 DNA replication proteins [BR:nti03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DNFV4_02362 DNA repair and recombination proteins [BR:nti03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DNFV4_02362    NER (nucleotide excision repair)     GGR (global genome repair) factors      DNFV4_02362    MMR (mismatch excision repair)     DNA ligase      DNFV4_02362   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DNFV4_02362 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT Nlig-Ia HHH_5 DNA_ligase_ZBD PTCB-BRCT DUF6982 Zn_ribbon_PADR1 BRCT_2 Motif Other DBs NCBI-ProteinID:  CAI4031939 UniProt:  A0AA86TC83 LinkDB All DBs Position NsDNF:complement(2401206..2403242) Genome browser AA seq 678 aa AA seqDB search MTMPPDILARVESLRNDIRRHDYLYYVKDRPVISDTEYDRLFRELQELEATYPELITPDS PTQRVGGQPQAELQKVSHERPMLSLDSIAAVEEVYAFDRRVKRELGLEQVEYTAEPKFDG LSIELVYREGRFVRGATRGDGTTGEDVTANLRTLRSVPLQLRTEAHPPAHLVVRGEVYMR LDDFQSLNRRITERGEEAFANPRNAAAGSLRQLDSRKTAERPLVLTCYEIMVQTGGLPST HWDELDRLADWGLPIPFQRRRCATIDEVILFHREMEEQRDALPFEIDGMVVKLDRRTWQE ALGVKSRSPRWAIAFKFPARREITVVQDIVVSVGRTGTLTPLALLKPVEVGGVTISRATL HNADEVSRKDIRVGDTVKVERAGDVIPAIAERVPVPGEQRSVPFAMPNHCPVCGSSVARE GAYYYCTGQAVCEAQLKGSIQHFAAKGAVDIDGLGEKTVAQLIDKGLVHDIADLYRLTRE QVLTLDGFADRSASLLLGAIERRRTIPLDRFLMGLGIRQVGQHIARVLANYFGNLEDLMA AAPERLLEIHEVGPEISRSVASFFQEERNRAVIRKLQDLGVRIEAKPRKDFEKAGDLPFK QKTVVFTGGLERWSREAAKRRVEELGGRVSSSVSKKTDYVVAGSEAGSKLADARRLGVRI LTEDEFEELAGKPESPER NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atgacaatgccgcccgacatcctcgcccgggtcgaatcgctccggaacgacatccgccgg cacgactacctctactatgtgaaagaccgcccggttatttcggacacggaatacgaccgg ctgtttcgcgaactccaggagctggaagcgacctacccggagctaatcacgccagactcc cccacccagcgggtcggcggccagccgcaggccgagctccagaaggtgtcgcacgagcgc ccgatgctgagtctggactccatcgccgccgtggaggaggtctatgcgttcgatcggagg gtcaaacgagaactcggcctcgagcaggtggagtacacggccgaaccgaagttcgacggg ctgtcgatcgagctggtctatcgcgaggggcgttttgtcaggggcgccaccaggggcgac gggacaaccggcgaggacgtgaccgccaacctgcgaaccctccggtcggtgccgctccag ttgcggaccgaggcccatccgccggcccatctggtggtgcgcggcgaggtctacatgcgc ctcgacgacttccaatccttgaaccgccggatcacggaacggggggaagaggccttcgcc aacccccgcaacgccgcagccggctcgctacggcagctcgattcccgcaagacggcggaa cgccccttggtcctcacctgttacgagatcatggttcaaaccggcggtcttccttcgacc cactgggacgagctggatcgattggcggactgggggttgccgatccccttccagcggcga cgctgcgcgacgatcgacgaggtgatcttgtttcaccgggagatggaggaacaacgggac gcgctgccctttgagatcgacggcatggtcgtgaagctcgatcgacgcacctggcaggag gcgctgggcgtcaagtcccgcagccctaggtgggcgatcgccttcaagttccccgcgaga agagagatcacggtcgtgcaggacatcgtggtgtcggtcggccgcactggcaccttgacc cccttggccctgctcaaaccggtcgaagtcggtggggtcacgatcagccgcgcgaccctg cacaacgccgacgaggtctcccgtaaagacatccgcgtgggcgatacggtcaaggtggag cgggccggagacgtcattcccgccatcgccgagcgggtgccggtgccgggagaacagcgg tcggtcccctttgcaatgccgaaccattgtccggtctgcggctcttccgtcgcccgcgaa ggggcctactattactgcaccggtcaggccgtctgcgaagctcaattgaagggctcgatt cagcactttgccgccaagggggccgtggacattgatggactcggcgagaaaacggtcgcg cagttgatcgacaagggtttggtccatgacatcgcggacctctaccggctgaccagggag caggtgctcacgctggacggtttcgcggatcgctccgcctcgctcctgctcggcgcgatc gagcggcgccggaccattcccctcgaccggttcctgatggggctcggcatccgccaagtg ggccaacatatcgcccgcgtcctggccaattatttcgggaacctggaagacctgatggcc gccgcgccggagcgtctcttggagattcatgaggtcggtccggagatctcacggagcgtc gcctcgtttttccaggaggagcggaaccgggcggttatccggaaactccaggacctgggc gtccgcatcgaggccaagccccggaaggatttcgagaaagccggtgacctcccgttcaag caaaagaccgtggtcttcaccggagggcttgaacggtggagcagagaagcggccaaacgg cgggtcgaggaactcggcgggcgggtcagctccagcgtcagcaagaagaccgactatgtc gtcgccggcagcgaggcaggatccaaactggccgacgcccggcggttgggggtgcgcatc ctgacagaggacgaattcgaggagttggccggaaagccggagtcgccggaacgttaa

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