Nicotiana tomentosiformis: 104099629
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Entry
104099629 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104099629
Enzymes [BR:
nto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
104099629
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104099629
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ABC_tran_CTD
TSC22
CT398_CC
Nnf1
Sas-6_C_CC
Motif
Other DBs
NCBI-GeneID:
104099629
NCBI-ProteinID:
XP_009604973
LinkDB
All DBs
Position
4:96596867..96605644
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AA seq
427 aa
AA seq
DB search
MDLVASLQSELETLRSRIKELESENVKLSARLSHCSCQETKEKSNGSLVKNGVLDGHGKK
KDKLRDLGCGAMVMHQFPKRYVALKVMYFGPRFYGFASEAQMDPTVEGELFKALERTRLI
SGDKRELQYSRCGRTDKGVSSVGQVISLFLRSKHRESRGDNKYSGEISVEESCGEMDYVR
VLNQVLPNDICIMGWSPIPVGFSARFSCLSRVYKYFFWHGNLNITAMETAAEKFLGEHDF
RNFCKMDAGNVHNYRRHIISFEILPFSESYKADQLMIMKIKGSAFLWHQIRCMVAVLFLI
GQGLESPNVIDALLDIERTPRKPQFLMAPEIPLVLQSCEFEGLKFICSSDAKQALNEHLE
RECRSYKLQAAIFHEAIISTSVEIDDNISSERTKKKEASYTPLLSRPTEPSYEERRKKLD
AGVRKPR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgtagcatccctacagtcggaactcgagactcttcgaagcaggattaaggaa
ttggaatccgaaaatgttaaattatctgcccggctctcgcattgcagttgtcaagagaca
aaagagaaaagtaacggcagccttgtgaagaacggagttttggatggtcatggaaagaag
aaagataagctcagagatttaggctgtggcgcaatggttatgcatcagttcccaaaaaga
tatgtcgctttgaaagtcatgtattttggtccaaggttttatggttttgcttcggaggct
caaatggatcccactgttgagggtgaacttttcaaagctctagagaggacaagactgata
tctggagacaagagggaattgcagtactcaagatgtggtagaacggacaagggagtttcc
tctgttggtcaagtgatttctctcttcttaaggtcaaaacatagggagtcaagaggagac
aataagtattctggggaaatttctgttgaagaatcttgtggagaaatggactatgtgagg
gtactaaatcaagttctgccaaatgacatttgcattatgggctggtctcctattccagtt
ggtttcagtgcaaggttcagttgtttgagcagggtgtacaagtacttcttttggcatggg
aatttgaatataacagcaatggaaactgctgctgagaaatttttaggggaacatgatttc
agaaatttttgcaaaatggacgcgggcaatgtgcacaactaccggaggcacataatatca
tttgaaattctcccctttagtgaaagttacaaagctgatcaactcatgattatgaaaatc
aaaggtagtgctttcctttggcatcaaatccggtgcatggttgctgtactatttctgatt
ggccagggtcttgagtcccctaatgtaatagatgcacttctggatattgaaagaacacca
cgcaaacctcagtttctaatggctccagagatacctctagttcttcaatcgtgtgaattt
gaaggtctcaaatttatttgttcatcagatgcaaagcaggctttgaatgaacatttggag
cgggaatgccgaagttataaacttcaagccgcaatttttcatgaagctatcataagcact
tctgttgaaattgatgacaatatatcaagtgagcgtactaagaagaaagaagcttcctac
actcctctactgtctcgaccaactgagccatcatatgaagagcggcgtaaaaagctggat
gcaggagttagaaagcctagatag
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