Nicotiana tomentosiformis: 104101890
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Entry
104101890 CDS
T05025
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104101890
03400 DNA repair and recombination proteins [BR:
nto03400
]
104101890
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104101890
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104101890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104101890
NCBI-ProteinID:
XP_009607726
LinkDB
All DBs
Position
3:complement(91114269..91144502)
Genome browser
AA seq
1704 aa
AA seq
DB search
MNLLKFYNKVPKISSASQNQSNREENADQSDFPSHSSLRQEIDTNGPKSDPAERTTPILE
YHPNHHDEIKRTYIQSGPCQPRSSKRQSEDFSAETPRKKPTRALRVQVDSDEEVGIEEKV
YYFRVLLPNGITLELQVREPPTEMPVQDFVIVVKRECLNVGGRTECGLKSKRQIYWTSKD
LHFVDAFENKITKTLDFRNLKPNYKSHILRLCDGSAEADKYENMWDLTPDTDLLKELPEE
YTFETALADLIDNSLQAVWSNQANQRRLISLKLTEKRITIFDTGPGMDGSAENSVVKWGK
MGASLHRSSRYRGIGGKPPYLMPFFGMFGYGGPIASMHLGRRTSVSSKTKDSKKVFVLHL
ERESLLSCSSSQQTWRTDGSVRDPLKDEIRESTGGSFTKVEIFHPKMRSESIPQLQYKLK
DIYFPYIQCDEVSNTGRTIMPIEFQVNGTNLAEIEGGEVATTNLQSCNGPEFVLQLRFHV
NDSTNVKVGSGKRSPLEANARLKCVYLPVVQGKESIEVILEKLEADGYGITENFESFSHV
SVRRLGRLLPDSRWAWLPFMEPKLRKGDRAEVLKRCCCRVKCFVETDAGFNPTPSKTDLA
HHHPYTIALRNFGNKPSEKEKDIHVEISKDGKKVTLLQVEKLYQDWIIQMHDRNDEEVDC
GEDQPTFVLSPSHKKELGVSSDVMRIHKVLRRKGITWKSGQKIKILKGACRGFHKNNVFA
TLEYIILEGCQGESGGEARIICRPLNVPVENGSRLIVDKGCASIEIRDSKSLPISVIDTG
KCLSVDITEWENQILKHQEKKTPSSIDILDAKQCEDLGIEGALPQDVVDAGHEPPEEIVA
VVRPASFSSSTASVSLDQKYIMKENFQMTLEVKFEAEADGKELGHIYSGRMNPSSHKGFT
GLYIFPLKERLPDIFQKAGIYLFRFSLEDSCTKFEKEVHVKALSAAASWKLISDGKTTLS
VRVGSFFPEVLSVACYDRFSNRIPFKLHTKIKMKLSSSCNAVESKCSYDQFISRDRYTMK
FKNVIIKTSDLDKIRPSYEATLHICSKDDPVSAAIPCTVIPGPLQHVRLHPVDFGKKLVP
GMIIEELALETFDKYRNHMRKDEHIKLMLEGLCLLEKGDCFLKVDVHGCVNLNGTLKVTS
GYGKPVFLSIFSGDDVVLKKEFQTEERWLRVASKVPKVCAAGSHLEDIVFEVINSTGEVD
EDIHDEEENGHSHTLLIRQDSLRGEDNVKYSFNHGRCIVHSIPLPKNEGLFCFVASHSRF
HELQTSIEVHVEKAVNSEHEIPQPRNPKKKLMLEDSYYSKAPEIVYDHTYDDFSDGSILL
LKDPCASAELEGRLQNQLEKKLVDDICKCGLSINKCDANLEILHSKESNIVLEMSNLGAN
ISPDSFHDLGYNRNMVVERIEGKADTAAAVVHKLLRSPISEQLYLQYANDILGVVALIGE
VQTHKLSSMFSAYLGEDQMLAVVCKSRAAARALEKYQMDGNVNCASPLDILAAKLGISIN
GRYLVICLEDIRPYTRVSSDLLGELALPLPTLSNGETPPGFLGYAVNMIFPPAEHLQLRT
ASGHGLRETLFYRLLGELQVYESREHLYMASSCIEDGAVSLDGGMMRGNGVVSVGFGEPY
ILFPVIFPENQLPLSSDRVEILKQLEEKKLELSQMQDQIKEENRRREKYTRKLAKKLEYK
KQIEVLGSPPGMYSSDMFISSATP
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgttgaaattttacaacaaagtaccaaaaataagttcggcgtctcaaaatcaa
tctaaccgagaagaaaatgccgatcaatcagatttcccctcacattcttctctaagacaa
gaaattgatacaaatggtccaaagtccgatccagctgaaagaacaactccaatattggag
tatcatccaaaccatcacgatgaaataaagaggacatacattcaaagtggtccttgccaa
cctcggtcgagcaaaaggcagagtgaagatttttcagccgaaacgccaaggaagaaacca
actagggctctaagagtccaagttgattcagatgaggaagttggcattgaagaaaaagtt
tattattttcgggttctgttgccaaatgggataactttagagttgcaagtacgtgaaccg
ccaactgaaatgccggttcaggattttgttattgtagtgaagcgagaatgccttaatgtt
gggggaagaacagagtgcggcctgaagtccaaacgacagatttattggacgagcaaggat
ttgcattttgtagatgcttttgagaacaagataacaaagacgttggatttcaggaatctt
aagcctaattacaagtctcatatattaaggctttgtgatggttcagctgaagcagataaa
tatgagaatatgtgggatcttacaccggatactgatttattgaaggagctacccgaagaa
tatacttttgaaactgcgcttgcagatttgattgataattcattgcaggctgtatggtct
aatcaagctaaccagaggagattaataagtctaaagttaactgagaagaggatcacaata
tttgacacaggccctggtatggatggaagtgctgaaaactctgtagtgaagtggggaaag
atgggagcttctctacatagatcatcgagatacagaggcataggaggaaaacctccatac
ttaatgcctttctttggtatgtttggttatggaggacctattgcatctatgcatttggga
agacgaacctcagtttcttcaaagacaaaggattctaagaaagtatttgtgttacatctt
gagagagaatctctgctcagctgttcttcttctcaacaaacttggaggaccgatggaagt
gttagagaccccttgaaagatgagattcgagaatcaactggtggtagcttcactaaagtt
gaaatttttcatccaaagatgagaagcgaaagcataccgcaattacaatacaaactgaag
gatatatacttcccttatattcagtgtgatgaagtatcaaatacaggaagaaccataatg
cctattgagtttcaggtcaatggcactaatttagcagaaattgaaggtggagaggtggca
acgacaaacttacagtcctgcaatggtcctgagtttgtattacagcttagatttcatgta
aatgatagcaccaatgtaaaagttggttcaggaaagagatcacccctagaagcaaatgct
cggctgaagtgtgtttatcttccagtggtgcagggtaaagagagtattgaggtgatattg
gaaaagctagaggcggatgggtatggaattacagagaattttgaaagttttagtcatgtc
tctgtcaggcggttgggtcgtctacttccggattctcgatgggcttggcttcccttcatg
gaacctaagctaagaaagggtgatagggctgaagtcttgaagagatgctgctgtagagta
aaatgttttgtagagaccgatgctggtttcaacccaacaccatcaaagactgacttagcc
catcaccatccttacaccattgcattaaggaactttggcaacaagccttctgagaaagag
aaagatattcatgttgagatatccaaagatggaaaaaaggtgactctcttgcaagtggag
aagctatatcaggactggataattcagatgcatgatcgcaatgatgaggaggttgactgt
ggagaggatcaacctacttttgtactcagcccttcgcacaagaaagagcttggtgtttct
tcagatgttatgagaattcataaagttttacggaggaaaggaataacttggaaatcaggg
cagaagattaaaattttgaagggagcttgtaggggtttccacaagaacaatgttttcgcc
acactagaatatattattcttgaaggatgtcagggggaatcaggtggtgaggctcggatt
atctgcaggccattaaacgtccctgttgagaacggttctcgccttatagttgataaaggg
tgtgctagcatagaaatccgtgactcaaaatctttgccgattagtgtgatcgacaccgga
aagtgcttatctgttgatattacggaatgggagaaccaaatcttgaaacaccaagagaaa
aaaactccatcgtcaattgacatattagatgccaagcaatgtgaagacttgggcattgag
ggggcactacctcaggatgttgttgatgctggacatgagcctcctgaggagattgttgca
gttgttcgtccagcttcttttagctctagtactgcatctgtaagtttggatcagaaatac
atcatgaaagaaaattttcagatgactctagaggtcaaatttgaagctgaagcggacggg
aaagaacttggtcatatttactctggccgaatgaatccttcgtcgcataaagggtttact
ggtctatatatattccccctgaaggagaggttaccagatatatttcagaaagcaggcatt
tacctatttcgattttctcttgaagacagttgtacaaaatttgaaaaggaagtgcatgtt
aaagcattgtctgcggctgctagttggaaacttataagtgatgggaagactacactcagt
gtaagggttggttctttttttccagaggttttgagcgttgcatgttatgatagattttcc
aatcgtattccattcaagttgcacacaaagataaagatgaagttaagttctagttgcaat
gctgttgagtccaagtgcagttatgatcaattcatttcacgtgacagatatacgatgaag
tttaagaatgtaattattaaaactagtgacttggataagattcgaccaagttatgaagct
acattacatatatgttcaaaggatgatccagtttcagcagcaattccttgtacagttatt
cctggacctttgcaacacgtccgtctgcatcctgtagattttggcaagaaattggttcca
ggaatgatcattgaggagcttgctttggagacatttgacaagtatcgtaatcatatgaga
aaagatgagcacatcaagctgatgctggaaggattatgtttactagaaaaaggagattgc
tttctgaaggttgacgttcatgggtgtgtaaaccttaatggaaccttgaaggttacatca
ggatatggtaaacctgttttcctttctattttttctggcgatgatgtagttctcaagaaa
gagttccaaactgaagagagatggttgcgagttgcatccaaggtacctaaagtttgtgct
gctggttctcatttggaagatattgtctttgaggtcataaattctactggtgaagtggat
gaagatatccatgatgaagaggaaaatggtcactctcatacccttctgataaggcaggac
tcattgaggggagaagacaatgtgaaatacagcttcaatcatggacgctgcattgtccac
tccattcctcttccaaagaatgaagggcttttctgttttgtagccagtcactctcgtttc
cacgagctgcagacaagcatagaggtgcatgttgagaaggcggtaaacagtgagcatgaa
attccccaacctagaaatccgaagaaaaagcttatgcttgaggattcatattattcaaaa
gccccagaaattgtgtatgatcacacctacgatgatttttctgatggaagtatattgctc
ttgaaggatccatgtgcttccgcagaactggaaggcagactacaaaaccaacttgaaaag
aaacttgtggatgatatttgcaagtgtggtctaagcatcaacaagtgtgacgcaaatctg
gaaatacttcacagtaaggaatcaaatattgtgcttgagatgtccaacttgggagcaaac
atcagtcctgattcttttcacgacttgggctacaatagaaacatggttgttgagaggatt
gaaggaaaggctgacactgcagctgctgttgtccacaagctcctcagatcaccaatatcg
gaacagctatatcttcaatatgctaatgacatacttggtgtggttgcactgattggagag
gttcagacccataagcttagcagtatgttttcagcatatctaggagaagatcaaatgctt
gctgtagtatgcaaatcccgtgcagctgccagagctcttgaaaagtatcaaatggatgga
aatgtgaattgcgccagtcctcttgacatattagcagctaagcttggaatttccatcaac
ggtcgatatttggttatatgccttgaggatataagaccatatacacgagtcagcagtgat
ctcctaggagaacttgctcttccgctccctactttatccaacggagaaactcccccaggc
tttttggggtatgcggttaatatgatattccctcctgcagagcatttgcagttgagaact
gcttcaggtcatggtcttcgtgagacattattttatcgcctgcttggtgagcttcaggta
tacgagtctagggagcacctttacatggcaagctcctgcatagaagatggtgcggtttcc
ttggatggtggaatgatgagagggaatggagttgtatctgttggattcggggaaccatac
attctatttccagtcatctttccggaaaaccagttgcccctctcttctgacagagtggag
atattgaagcaacttgaagaaaagaagctggagctaagtcaaatgcaagatcagataaag
gaagagaataggcgtagagaaaagtacacgaggaagttggccaaaaagctcgagtataaa
aagcagatagaagtgttgggatctccacctggaatgtacagctctgacatgtttatcagc
agtgctactccttga
DBGET
integrated database retrieval system
