Nicotiana tomentosiformis: 104102345
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Entry
104102345 CDS
T05025
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104102345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104102345
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104102345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
AAA_15
SMC_N
NACHT
AAA
AAA_18
AAA_22
AAA_23
AAA_24
AAA_5
AAA_25
AAA_30
AAA_16
SRP54
AAA_33
AAA_14
AAA_7
PduV-EutP
nSTAND_NTPase5
Zeta_toxin
DUF3584
FtsK_SpoIIIE
Arf
AAA_13
Motif
Other DBs
NCBI-GeneID:
104102345
NCBI-ProteinID:
XP_009608325
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All DBs
Position
1:110413132..110416374
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AA seq
286 aa
AA seq
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MEGESNSIQVDGMQFSYDFQSPIFFDFSLKISPGSRCLLVGANGSGKTTLLRILAGKHMV
GGRDVVKVLNFSAFHDTHLVCDGDLAYLGESWSKNVGSAGEIPLQGDFSAEHMIFGVEGV
DPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARMD
LLDFFKEECEQRGATIVYATHIFDGLESWATDLVYIQDGVLKRSEKLPELPELKSSPNLL
SVVENWLRSETTIEKKKPVIAPPKVQKSSPFGSSPFQSSRHMAYFR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaatcaaacagtattcaagtcgatggaatgcaattctcttacgatttccaa
agtcctatctttttcgatttcagcctaaagatttctcccggatctcgatgtctccttgtc
ggtgcaaatggatccgggaagacgacattgttgaggatattggcgggaaagcatatggtg
ggaggaagagatgtagtgaaggtgctgaatttttcggcatttcatgacacccaccttgtc
tgtgatggtgatctggcatacctaggagagtcatggagcaaaaatgttggctctgctggg
gagattccacttcagggagatttttcagcagaacatatgatatttggagtcgaaggagtc
gatccagttcggcgagagaagttgattgagctgctggatattgatctgcaatggcgtatg
cacaaggtatctgatggtcagagacgcagagttcaaatctgcatgggtctccttcacccc
tataaggttcttttgctggatgaggttacagttgacttagatgttgtcgcaaggatggat
ttgttggacttctttaaggaagaatgcgaacagagaggagctactattgtctatgcaaca
catatatttgatggactggagtcctgggcaacagatcttgtttacatccaagatggagtt
ctgaagaggtctgagaaattacccgagcttcccgagttgaagtcttcccccaatttgctt
tcagtagttgagaactggttgaggtctgagaccacgattgagaaaaagaagccggttatc
gccccaccaaaagttcagaaatcctctccttttggctcttctccgtttcagtcatctaga
catatggcatatttccgctga
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