Nicotiana tomentosiformis: 104106094
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Entry
104106094 CDS
T05025
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104106094
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104106094
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_EZ
Adaptin_N
Cnd1
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
104106094
NCBI-ProteinID:
XP_009612868
LinkDB
All DBs
Position
5:45880186..45887696
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AA seq
926 aa
AA seq
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MEHHLRRNLETNENIRPQALLQALSLIVNPSTSDSTLSFILKTLTLSLKNLDNNPNTNPF
LSHHILHLFSLLSHHRPHLSHNLISTVREFSLIPSTSTRSLADALACLSISDINVNDESI
FLSLVLRPCISVRHWLLFNVSKFDIRPSVLLTVLLGFTKDPYPYIRGAALDGLADLCKCI
VVEDESLIHGCYLRAVELLFDSEDSVRCSAVRAVSACGQLIVASKQERSKRDRSDALFLQ
LCSMVRDMSVKVRIEVFSALGKIEIVSEYILLQTLSKKASSATKEMNFPGQYAEKIFRIP
ASSASFAFLHGLEDEFSEVRESACRALQTLAILSADFSHEVVNFLMDVLNDDSTAVRLQA
LDTMHHMAMVGHLKMQQAHLHMFLGILLDSHSLIRCTARKVLKLTELPSLAMFKMCVDGL
IRDFELYPQDETEVFSALFVVGQNNRNFLVSLINEVSQMIEPSSGGKLGYDNARKASYLV
LATSAPVSMKQQTCSIPPRIFSYAVTLLGRIARSLAEIVDQRTLLAYFSYCSRFTFVSAS
EFFKVEEHLEGCDVQLIQRCEAISNYHIRRKLQLKEAESSLLDFQVEQNKEINCVNIILQ
VVIDIWPSLKLGLIDEVTRTLRSLKAELRMISDNNHRGELVFALLYIDALERLGHLCSHL
MFSKEFYCHECGKLQCSLGKLDRCLRDMRYKFIGLTKDDNVLILELIIANGILTLCKMEA
CVDETTLKKLHSVMSCIEHICGEGSTVSSSFVVEVQKSLSEIDTTSCPILDNPYLLLKSL
EHFTPRKAVSSGNLKCMEAELHFQGNDFQNPLPFISGLLVGVSLDITLHNIPSENRLWIK
MSLEEKLTQFVFLDFHEIEGHNEVRKFTFVAPFYQTPRANCFSLKICIVLECMSDDDQLF
RSCGGPNHEVAHLCEEKEVYFSAAVR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccacctccggaggaatttggagactaacgagaacatcaggcctcaagctctc
ttacaagccctctctctcattgtcaacccttccacctccgactccacactttcattcata
ctcaaaaccctaacgctctctctcaaaaaccttgacaataaccctaatacgaatcctttt
ctcagccaccacattctccacctcttctctctactttcccatcaccgtccacacctctct
cacaacctcatctccaccgtccgtgaattctctctcatcccttcaacttccacgcgctca
ctcgccgatgccctcgcttgtctctccatctcagatatcaacgttaacgatgaatcgata
ttcctctcactcgttcttcgtccctgtatttctgttcgccattggttgctttttaatgtg
agtaaatttgacatacggccgtcggttttgcttacggttctgttaggatttacgaaggac
ccctatccgtacattcgtggtgctgctttggatggattagctgatttgtgcaagtgcatt
gttgtggaagatgaaagtctcatccacggttgctatcttcgagctgttgagcttttgttt
gattccgaggactccgtgcgatgctctgctgttcgtgcggttagtgcatgcgggcagtta
attgtggcatctaaacaagagagaagtaaaagggaccggtctgacgcattatttctgcag
ctatgttcaatggtgagagacatgagtgtcaaggtcaggattgaagtatttagtgcccta
gggaagattgaaattgtttcggaatatattctgttacaaacgctatctaagaaagcttca
tctgcaacaaaagaaatgaattttcctggccagtacgctgagaaaattttcaggatacca
gcatcgagtgctagttttgcttttctacatgggctggaggatgaatttagtgaggtaaga
gaatctgcttgccgagctttgcaaacattggctatcctttctgctgatttttctcatgag
gttgtgaactttttaatggacgtacttaatgatgattcaacggctgtaagattacaagct
ttagatactatgcatcatatggcgatggttggccatctaaagatgcaacaagcgcatctg
catatgtttcttgggattctacttgacagtcacagcttgataagatgtacagcgaggaag
gtactaaaactgacagaactaccgagcttggctatgttcaagatgtgtgttgatggactt
ataagagattttgaattgtatccacaggatgaaactgaagtcttttccgctttgttcgtg
gttgggcaaaacaacagaaattttttagtcagcttgattaatgaagtttcccaaatgata
gagccgtcttctggaggtaagttgggttatgacaatgcaagaaaagcttcatatttagtg
ttagccacctctgcgccagtttcaatgaagcagcaaacttgcagcattccaccaagaata
ttctcttatgcagtcacactattagggagaatcgctcgtagtttggctgaaatagttgac
cagagaacacttttggcttatttttcttattgcagtagattcacatttgtttctgcatcg
gagttttttaaagtggaagagcatctggagggatgtgatgtgcaattgatacaaagatgt
gaagctatctctaattatcacattcggaggaaattacaactgaaggaagcagaaagctcg
cttttggacttccaggttgagcagaataaagagataaactgtgtgaatatcatccttcag
gtggtaatagacatttggccatcgctgaaacttggattgattgatgaagtaactcgaaca
ttgaggagtttgaaggcagaattgagaatgatatcagataacaatcacaggggtgaatta
gtgtttgctttactatatatagatgctttggaacgacttggacacttatgctcacacttg
atgttctccaaggagttctactgccatgaatgtgggaaattgcagtgctctttgggaaaa
ctcgacagatgcctgagggatatgaggtataagttcataggtttaaccaaagacgacaat
gttcttatcttagagttaataattgcaaatggtatattgacactttgtaaaatggaagcc
tgtgtagacgagactactctaaagaaattacattctgtgatgtcttgtattgaacatatt
tgtggagaaggatccactgtatcgtccagttttgtggttgaagttcagaagtcattgagt
gagattgataccactagttgtccgatcttggataatccatatctccttcttaagtcactc
gagcatttcactccaagaaaggcagtttcttcgggaaatctcaaatgtatggaagctgaa
ctgcattttcaaggcaatgactttcaaaatcctcttcctttcatctctgggctgcttgtt
ggtgtatccttagatatcacactccataacatcccgagcgagaataggctgtggataaaa
atgagtctcgaagagaagttaactcaatttgttttcctggattttcatgagattgaaggg
cacaatgaagtaaggaaattcacgtttgttgcacccttctatcaaacccccagggcaaac
tgtttctcattgaagatttgtatcgttttagaatgcatgtctgacgatgatcagttgttc
aggagctgtggaggtcctaatcatgaagttgctcatctctgtgaagaaaaagaagtctat
ttttccgccgccgttaggtag
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