Nicotiana tomentosiformis: 104118403
Help
Entry
104118403 CDS
T05025
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104118403
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
104118403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
DEAD
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_4
FAD_binding_2
zf-rbx1
NMB0537_N
Mtf2
Motif
Other DBs
NCBI-GeneID:
104118403
NCBI-ProteinID:
XP_009627930
LinkDB
All DBs
Position
5:34007479..34019197
Genome browser
AA seq
916 aa
AA seq
DB search
MKLRSFPSSSSIKGEGSYQYQDSSDEDDFLPMSSDSDYIGSSDEDEDIFNLLRESQTNGV
LDNDYSEEVLSNIIKRRKVGSSRKRGSRNIKSKEEQVDEEHVDWMMNEVGCGVEVDSGYL
LLMGRIEDRKKNRDKNKKKRPTLMWEIWEEENDRWMAENYTNDLDLDCQNGLVNETAETP
SDLLMPLLRYQKEWLAWALKQEESTARGGVLADEMGMGKTVQAIALVLAKRELGQAISES
SLPPSAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHK
FAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAKQS
KQERKKLKPGGKMSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKRKIKTDAGSIDDAT
GVDQDMITRKSILHSVKWNRIILDEAHYVKDRRCNTARAIFALESSYKWALSGTPLQNRV
GELYSLVRFLQMIPYSYYFCKDCDCRVLDYSSTDCPHCPHKSVRHFCWWNKYIASPIQSQ
GNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLY
NESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYAE
QPCGLCHDPVEDPVVASCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANEKGDQKT
KPHVKGFRSSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIH
YSLQKSGISCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLM
DPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSE
ALGKLTEADLKFLFVT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgttctttcccttcttcgtcttcgatcaaaggagaaggaagctaccaatat
caggatagctctgatgaggatgattttcttcctatgtcttcggattcagattacatcgga
agcagtgacgaagatgaagatatatttaatttgttgagggaatcccaaactaatggagtt
cttgataatgattacagtgaggaagttttgtccaatataataaaaagaaggaaagtagga
tcctctagaaagaggggcagtaggaatatcaaatcaaaggaagagcaggtagacgaggag
catgtagattggatgatgaatgaagtaggatgtggggttgaagtagatagtggctacctt
ctattgatggggaggatagaggataggaagaagaaccgtgacaagaataaaaagaagaga
cccactttgatgtgggagatctgggaagaagagaacgatcggtggatggctgaaaactat
acaaatgatttagacttggattgtcagaacgggttggtgaatgaaactgctgagacacca
tcagatttgctcatgccgttgctgaggtaccagaaagagtggttggcttgggcattgaag
caagaagaatctactgctagaggcggtgttcttgccgatgagatggggatgggaaagact
gttcaagctatagctcttgtgcttgctaaacgcgaattagggcaagcaatttctgaatcc
agtttaccgccatctgccccttgtacttcccaggagctcccagcagtgaaaggaactctt
gttatatgtcctgttgttgctgtgattcagtgggtcagtgagattgaccgctttaccact
aaaggaagcaacaaaattcttgtttatcatggtgcaaacagggagaaaaatatccacaaa
ttcgcagaatatgattttgttatcaccacatactccacagtggaggctgagtataggaaa
aatgtgatgccaccaaaagaaaaatgccagtggtgtggaaaatctttttatgaacaaaag
ttgtctgttcaccaaagatacttctgtgggccagatgctgttagaactgctaagcaatca
aagcaggagaggaagaagttaaagcctggaggaaagatgtcaaagctgaaaaaagaatct
attaaaggcaaggctaagacagacagtgattcagagattgagacaggtagtaaaagaggt
cgtgggaagggcgtgaagcgcaagatcaagacagatgctggttctattgatgatgcaacc
ggtgttgatcaagatatgatcacgaggaagtcaattttgcactctgtaaaatggaaccgt
ataattttggatgaggcccattatgtgaaagatagacgctgcaatactgcaagagctatt
tttgcgttagaatcttcttataagtgggcgttaagcggtactcccctccagaaccgtgta
ggagagttgtactcacttgttcgtttcctgcaaatgattccttactcgtactacttctgc
aaagattgtgattgcagagtgttggactatagctcaaccgactgcccacattgcccccac
aaatctgttcggcacttttgttggtggaataaatatattgcctcacccatacaatctcaa
gggaatcgtgggactggtagagatgcgatggttttgttgaaacacaaaattttgaaaagc
atattgctaagacgtactaaaaagggaagggctgctgatcttgcacttcctcccaggatt
gttaccttgcgcaaagattctttggatgttaaagaagaagactattacacatcactgtac
aatgaaagtcaggcacaatttaatacatacattcaagctggtactctgatgaataactat
gctcacatttttgatctactcacacgcctgcgacaggcagttgatcatccttaccttgtg
gtatactctagtactgctttggctagaagtggaaacactgatgattctggctatgctgaa
caaccatgtggtttatgtcatgatccagtagaagatccagttgttgcttcttgcacacat
gtcttttgcaagtcatgtctgatagatttttctgcaagcgtggggcaagtgtcatgccct
tcatgttctaaaccacttacagtggatttcactgcaaatgagaagggggatcagaaaact
aaaccgcatgtcaaagggtttaggtcatcaagtatactgaacagaattcgtcttaatgat
ttccagacaagcacaaaaatagatgctttgagagaagaaataaggttcatggttgaaaga
gatggttctgcaaaagcaatagttttcagccaattcacatcgtttttggatctgatacac
tattctctacagaagtcgggcatcagttgtgttcaattagttggatccatgtctataact
gcaagagattctgcaattacaagatttactgaggatccagattgcaggatattccttatg
agcttaaaagctggaggtgttgccctcaatcttacagtggcatcacatgttttcttgatg
gatccttggtggaatcctgctgtggagcagcaagcccaagatagaatccatcgaataggg
cagtataaaccaatcaggattgtgagatttgtgattgagaatacaattgaggagaggatc
ctaaagttgcaagagaagaaggaactggtttttgaagggacggtcggtggttcttcggag
gccttgggaaagctaacagaggcagacttgaaattcttgttcgtaacctaa
DBGET
integrated database retrieval system
