Nonlabens ulvanivorans: R1T42_09050
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Entry
R1T42_09050 CDS
T09493
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00300
Lysine biosynthesis
nul00550
Peptidoglycan biosynthesis
nul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R1T42_09050
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T42_09050
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
R1T42_09050
Enzymes [BR:
nul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
R1T42_09050
Peptidoglycan biosynthesis and degradation proteins [BR:
nul01011
]
Precursor biosynthesis
Amino acid ligase
R1T42_09050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF3440
Motif
Other DBs
NCBI-ProteinID:
WOI21827
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All DBs
Position
complement(2004776..2006242)
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AA seq
488 aa
AA seq
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MRNLKDLLYKVSLELVIGPTDISVERVQFDSREIKEGDVFVALKGSAVDGHQFIEKAVAS
GARAVILEDLPDYQSDNVTYVQVNHAHKALALIGANYYGNPSKDLKLVGVTGTNGKTTTT
SLLYQLFKNLGFKTGLISTVEILINGKVIPTKHTTPDPITINSHLADMRDAGVDYCFMEV
SSHGIDQERVTGLYFVGGMFTNLTHDHLDYHSTFAEYRDVKKRFFDMLPSKAFALTNRDD
KNGEFMLQNTKARKLGYALKTYTDYRAQIIENQFGGLQLKVNNQELWTKMIGEFNAYNVL
AIYGCAIELGLEATEVLEAISKLDGVSGRFQYFTTAAQRITAIVDYAHTPDALKNVLDTI
NAIRTRNEKLITVVGCGGDRDKTKRPVMANIAASLSDQVIFTSDNPRTENPDDILDDMEA
GVEPLDFKKTLTVTDRRNAIKTAVQLAQANDIILIAGKGHETYQEINGVRSDFNDRMIVA
DLLNQLNK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttaaaagatttattatataaagtgagcctggagttggttattggtcctaca
gatatttctgtagaacgagtacaatttgattctagagagattaaagaaggagatgttttt
gtagctcttaaaggtagtgctgtagacggtcatcaatttattgaaaaagctgtagctagt
ggtgctagggctgtcatattagaagatttaccagattaccaatctgataatgttacttat
gtacaggttaatcatgctcacaaagcgctagcactgataggagcaaattattatggtaat
ccttctaaggatttaaaattagttggtgttactggaactaacggtaagactaccacaact
agtttattatatcaattatttaaaaacctaggttttaaaacaggtttaatttctaccgta
gagattttaattaatggtaaagtaattcctactaaacatactactccagatccaataact
ataaatagtcatcttgccgatatgcgcgatgctggtgtagattattgttttatggaggta
agtagtcatggtatcgatcaggaacgtgtaaccggtctatattttgtaggtggcatgttt
acaaatttaacccatgaccatctagattatcacagcacctttgcagagtatcgagatgtg
aagaaacgattctttgatatgctaccttctaaggcttttgcattaacaaatcgcgatgat
aagaacggtgaatttatgttgcagaatactaaagctcgtaagctaggttatgctctgaaa
acatatacagattatcgtgctcaaattatagagaatcaatttggtggtctacaattaaaa
gtaaataatcaagaattatggactaaaatgatcggtgaatttaatgcctataatgtgctt
gctatttatggttgtgctatagagttagggttagaggctactgaggttttagaagcgatt
tcaaagttagatggtgtttctggaagatttcaatattttacaactgccgcacaacgcatc
actgctattgtagactatgcccacacgccagatgctttaaagaatgtattagatacgatt
aatgctatccgtacacgtaatgaaaaattaataactgttgtcgggtgtggcggtgatcga
gataaaactaaaagacctgtcatggcaaatatagctgcgtcgttaagtgatcaggtcata
tttactagtgataatccacgaacagagaatccagatgatatcctagatgatatggaagct
ggtgtagaacctttagactttaaaaaaacacttaccgtgaccgatcgtagaaatgctatt
aaaaccgctgtacaattggcacaagctaatgacattattcttatcgcgggaaaaggacac
gaaacatatcaagaaattaatggtgtgcgatctgattttaatgaccgcatgattgtggca
gacctacttaaccaacttaataaataa
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