Candidatus Nitrohelix vancouverensis: G3M78_02710
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Entry
G3M78_02710 CDS
T09852
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva01501
beta-Lactam resistance
nva01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G3M78_02710
01503 Cationic antimicrobial peptide (CAMP) resistance
G3M78_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nva03036
]
G3M78_02710
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nva02000
]
G3M78_02710
01504 Antimicrobial resistance genes [BR:
nva01504
]
G3M78_02710
Chromosome and associated proteins [BR:
nva03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
G3M78_02710
Transporters [BR:
nva02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
G3M78_02710
Antimicrobial resistance genes [BR:
nva01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G3M78_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
YknX_C
HH_MFP_RND
BSH_CzcB
HH_AAEA_pHBA
BSH_CusB
RibLong
CzcB_C
BSH_YknX
HH_EMRA
Beta-barrel_RND_2
Motif
Other DBs
NCBI-ProteinID:
QPJ64363
UniProt:
A0A7T0C0M3
LinkDB
All DBs
Position
complement(553436..554626)
Genome browser
AA seq
396 aa
AA seq
DB search
MRKRTVNDHRQFFFGALCIAASLVLSGCEDKPSVAAPPAAEKPLPAVTVTPVIHEKVTRT
HELVGRTAAIKTVNLVSRVPGYLEQRNFKEGEDIKKGTRLFVIEQAPYKIALKAAQAKVA
EARAGYENAEAYLKRLQSVRKGGVSQSDLDKAESDFLKAEAGLMEATANEDQAKLDLSYT
EIYAPIDGRIGRVSINEGNLVTPDTGTLATMVQMDPMYVLFTVSAGAVLTEFQNQIKKGK
ATTFTPKLQLPNGTMYSFDGTEDFVSHLVDEKTGTITIRAVFPNPGMNVLPGKADIPHTL
RLLLPGQFVKVFVKRDEVRTEKVIPQMAIQQDQGGKFVLVVDGENRVHKRAIKVGEKHGV
KWIVKEGLEIGERVITQGLQKVRPGVAVQTSSHEQS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgaacagtgaacgatcacagacagttttttttcggcgcgctctgcattgcg
gcgtcccttgttttgtccgggtgcgaggacaagcccagcgtcgccgctcctcctgcggcg
gagaagcctttgcctgcagtcaccgtaacgccggtgattcatgaaaaagtgacgcgcact
catgaactggtcgggcgcacggcggcgattaaaacggtcaatctcgtgtcccgtgtgccg
ggctatctggagcaaaggaatttcaaggaaggcgaggatatcaaaaagggaacgcgactg
tttgtgatagaacaggctccttataagatcgcattgaaggcggctcaggccaaggttgca
gaagcccgcgccggttatgaaaatgccgaagcgtatttgaaacgtcttcaatccgtgcgc
aaaggcggcgtctcgcaatcggatctggacaaggcggaaagcgatttcctcaaggccgag
gcaggattgatggaggccaccgccaacgaggatcaggccaagctggatctcagctacacg
gaaatttacgcgccgatagacggacgcatcggtcgggtgtcgatcaacgaaggcaatctg
gtgacgccggataccgggactttggcgacgatggtgcagatggacccgatgtatgtgctc
ttcaccgtcagcgcgggggcggtgctgaccgaatttcagaatcagatcaaaaagggcaag
gcgacgaccttcacgcctaaattgcagttgccgaacggaaccatgtattcctttgatgga
accgaagactttgtcagccatcttgtcgacgagaagaccggcaccatcaccatccgcgcg
gtgtttcccaatccgggaatgaacgtgctacccggcaaggcggatataccgcacaccctg
cgcctgctgttgccgggacagttcgtgaaagtattcgtgaaacgcgatgaagtccgcact
gaaaaggtgatcccgcagatggcgatccaacaggatcagggcggaaaatttgtgctggtg
gtggacggagagaatcgcgtccacaagcgagccatcaaggtgggcgagaaacacggcgtc
aaatggatcgtcaaggaaggtctggaaattggagaaagggtgatcacgcagggcctgcag
aaagtgcggccgggcgtggctgtgcaaacctcctcccatgaacaatcgtga
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