Candidatus Nitrohelix vancouverensis: G3M78_11630
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Entry
G3M78_11630 CDS
T09852
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3M78_11630 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nva03400
]
G3M78_11630 (nth)
Enzymes [BR:
nva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G3M78_11630 (nth)
DNA repair and recombination proteins [BR:
nva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3M78_11630 (nth)
Prokaryotic type
G3M78_11630 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
Ogg-HhH
RecR_HhH
Fe_hydrogense_Fe-S_bd
Motif
Other DBs
NCBI-ProteinID:
QPJ66843
UniProt:
A0A7T0G4Y2
LinkDB
All DBs
Position
2504743..2505387
Genome browser
AA seq
214 aa
AA seq
DB search
MNAVDSKTVNRIYAKLKKSLPDARSELDYKNCFELLIAVILSAQATDKSVNKATGELYKS
YNTPQGLIECGETRLRSYIKTIGLAPTKAKNIIKTCQILLAQYEGQVPDDREALESLPGV
GRKTANVVLNEGFGKPTIAVDTHVFRLANRTGLAPGKNVLMTEMKLLEVTPKKWLKDAHR
YLILHGRYVCTAKNFKCGACAIRSECEFPDKTSS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
attaacgcagtggattcaaaaaccgtcaatcgaatctacgccaagctgaagaaaagcctt
ccagacgcgcgctcggaactcgattataaaaattgctttgagctattaatcgcagtgata
ctcagcgcgcaagccaccgacaaatccgtcaacaaagccaccggcgaactttataaatcc
tataacaccccgcaaggtttgattgaatgcggtgaaacacgcctgcgatcctatatcaaa
acaatcggtctggcccccactaaagcgaagaatattataaagacctgccaaatacttctc
gctcaatatgaaggtcaggtaccggatgatcgtgaggctctggagagtttgccaggcgtc
ggacgaaagaccgctaatgtggtcttgaatgaaggatttggaaaaccgacgattgcagtg
gacacgcatgtttttcggctagccaatcgaaccggtctcgctccgggaaaaaatgtgctc
atgacagaaatgaaacttttagaagtaacgcctaagaaatggctgaaagacgcgcatcgc
tatctgattcttcacggtcgttatgtgtgcacagcgaaaaactttaagtgcggcgcctgc
gcgattcgatccgaatgtgaatttcccgacaagacatctagctga
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