Nematostella vectensis (starlet sea anemone): 5510506
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Entry
5510506 CDS
T01037
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
5510506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
PspA_IM30
Lebercilin
zf-RING_5
zf-C3HC4_5
zf-C3HC4_3
Sina_ZnF
CEP104_ZnF
NEAP
Pol_alpha_B_N
Rv0250c
Ast
Par-4_C
ATG16
Motif
Other DBs
NCBI-GeneID:
5510506
NCBI-ProteinID:
XP_032235503
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MGRSWRKRRYAPCQILPAGVGYFSFSKKLIKFRIGRITFINFYQEVYVFQCPVETLGFSL
YDIAMVGYEIATTDTAIAAKHLCAKCRLIVKDAVQTACGHRYCSPCISPLLSRGPIQCDV
CGSTITKPETFRDKFADREILELHVHCVNQPHGCPWEGELRHRQNHHTKCEFNPISCVHP
ECGKKLSVAKLPEHLQNECQYREETCSYCEQPVVVARMKEHHEKTCPSYPVNCPKCSKEL
IRVELARHLDPASVNACEQLITECPFSKVGCQEVKVMNSKERKVHLEKGVVGHTSLLLAL
FMELSRYIEESLPRLAMGHPGDSVSKLQELCNKAIMGIDSVVKELAVFKTKQEDHESRIK
KLEQRGGGIGVNGLQSMRISENIDNEAIGDVLRRVANVEAKGADHEVLVVEAHSAVDELR
REVGRLNVKLQESDDIIRRLERQLELHDQGTGLRNLAIADLEERLNTLQGTTFDSVLLWK
ITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNHHVSLFFVIMRGE
FDALLRWPFRQKVTLMLLDQDNVEHVIDAFRPDPSSSSFQRPRAEMNIASGCPLFCSHEQ
LTQHAYIRDDTMFLKIIVDKPDWA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttcgtggagaaaaagacgatacgcgccatgccaaattctaccagccggggta
gggtacttcagtttttccaagaaattaatcaagttccgcattggacgaataacttttatc
aacttctatcaagaagtttacgttttccaatgccccgtggaaacactcggattttcatta
tatgatattgctatggtaggatacgaaatcgccacgacagatactgcaattgccgcgaag
cacctgtgtgcaaagtgccgccttattgtcaaagacgctgtacagactgcctgtgggcac
cggtactgctctccgtgcataagtcccctattaagccgaggtccaatacaatgtgacgtt
tgtggctcaacaataaccaagccggagaccttccgtgacaaattcgccgatcgtgagata
ctggaactccatgtgcactgtgtgaaccagcctcacggctgcccctgggagggagaactg
cgacacagacagaatcaccacaccaagtgcgagtttaatccaatatcctgtgtgcatcca
gagtgtggcaagaaactgtctgtggctaagctaccagagcatctacagaacgaatgtcag
tacagagaagagacttgctcgtattgtgaacaacccgtggtggtagcccgcatgaaggaa
caccacgagaagacgtgtccttcatatcccgtcaactgcccgaagtgcagcaaagagcta
attcgagttgagttggcaaggcatcttgaccctgcaagtgttaatgcttgtgaacagcta
atcacagagtgtcccttcagcaaagtgggatgccaagaagtgaaggtaatgaacagcaaa
gagcgtaaggtgcatcttgagaagggcgtggtggggcacaccagcctacttctagcgcta
ttcatggaactctcgcgctacattgaggagagccttcctcgcctggcgatgggccaccct
ggtgacagtgtctccaaactgcaagaattgtgcaataaagccatcatgggaatagacagt
gtcgtcaaagaactcgctgttttcaaaacaaaacaagaggaccacgaaagcaggataaaa
aagctggagcaaagaggtggtggaatcggcgtcaacgggctgcagtctatgcggatttca
gaaaacattgataacgaagctataggagatgtgctgcggcgtgtggccaatgtggaagcc
aagggtgcggatcatgaagtactggtcgtcgaagcgcactcagccgtagatgaactacgc
agggaggtgggacgtctaaatgtcaagctacaggaatccgatgacatcattcgtaggctt
gagcggcagctagagttacacgaccagggaacaggactacgcaatcttgcaatcgctgat
ctggaagaacggctaaacaccctacaaggcacaacgttcgatagtgttctcttgtggaag
atcactaacgtcgcgaacaaacgcagcgaggcaacgtcaggacgtgtgacctcattctac
agcccttgctttttcaccggtccccatgggtacaagatgtgcgcgcgcatctacctgaat
ggggacggcatggggcgtaaccatcacgtgtctttgttctttgttatcatgcgcggtgag
ttcgatgccctgctgcgctggcccttcagacaaaaggtaacgttgatgctcctggaccaa
gataatgtggagcacgtgatcgacgcgttccgcccagacccttccagcagctcgttccag
cgtcctcgcgccgagatgaacatcgcgagtggctgtccgctcttctgctcccacgaacag
cttacgcaacacgcgtacattcgtgacgacacgatgttccttaagatcatcgtggacaag
ccagactgggcatga
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