Nematostella vectensis (starlet sea anemone): 5513940
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Entry
5513940 CDS
T01037
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC5513940
KO
K16857
thrombospondin 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04145
Phagosome
nve04148
Efferocytosis
nve04350
TGF-beta signaling pathway
nve04512
ECM-receptor interaction
nve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
5513940
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
5513940
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
5513940
04148 Efferocytosis
5513940
09142 Cell motility
04820 Cytoskeleton in muscle cells
5513940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nve04131
]
5513940
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nve00536
]
5513940
Membrane trafficking [BR:
nve04131
]
Endocytosis
Phagocytosis
Opsonins
5513940
Glycosaminoglycan binding proteins [BR:
nve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
5513940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
MAM
Laminin_G_3
Sushi
EGF
EGF_3
hEGF
Orbi_NS3
cEGF
Motif
Other DBs
NCBI-GeneID:
5513940
NCBI-ProteinID:
XP_032239458
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MEQQQSEKTHPRANFFPYRRSSLAVKDRRDVYISNEPLAEDQNTQEFIELPSVANETSTT
ASGTMGEKILRWGRKGNKVSQQPLQTGNTEVYNDDGGPSPFIQKGEPQDEGPASVEEKKR
RRKCLFYMVLTVIIAVVVLIISIPVTVTEMAKATQADRLKVGNKDNFTPITSCKGFPANL
SHGSVVCSGNNISSSCQIVCDSGYTLQSRYTGEFICTSDGLWNGTNGTCTPVECGIIQEY
LQGSSVGCQGVNTPLCTIGISHGSLQCNGSRHRDMCVITCEPNYVQNASNPLCFADGSWS
DLNIGCVAKDPCLMGQNDCNKINGTCTVDAPGKYTCACKLGFTGNGIECGQDEDLDGFPD
KKLPCYEASCQGDNCPLTPNSGQEDTDSDGVGDACDDDDDNDGVRDIRDNCPLISNPEQM
DTDQDTIGDSCDNCPRVWNKRQRDANGDGRGDACTADPDDDGIEGSHDNCPMHYNPEQLD
RDRDGFGDTCDNCPAVPNNQSDTNQNLIGDACEGVDSDHDGVIDRADNCVSVPNADQVDT
DSDGIGDACDSDTDGDGVSDGSDNCRLVPNQAQSDVDGDGVGDACQTDADGDTVSNTKDD
FAVDKFKNKTDFRRFEEVLLDDEGNSQPPPKWVIRDSGREVVQLRNGNPGLLLTYPRFDH
LVYTGTFFISDSLDDDFAGIVFGYQSNRNFYLVSWKQKTQTYNLPTNASYPRSCGRQGIS
LMAVNSSTGPGVELRDALWETGNTIHQAQLLWHDPAPAWRPFTAYWWKLVHDPDTGRIRV
RWYEGSRLISDSGNIETSXYRGGRLGMYVFSQSDVYYSALATRTPQITDYALSFDGRHGY
VELPALEDFTGRDDSFTAEAWVWTSGPDGPVVCDLPPIDFGTLTFNTSFLKQSTDDDDDW
KLSNRGTPTSSTGPAADHTTGSGFYAFLEASGIARGNRASFETPWFLASEGCNVSFFYHM
WDGRASPTQMGFLQVDVRSTRVTWWQVFQRKGNHGNTWHQAVLDLSTNSGLIAVRFTAVK
GDGYKSDVALDDVIFSAGCGSRLECHRTPEFAPVFGDEDGVGPHLSITGGLVQGGVSHAS
RATGHATFLYNRWNHVALQYNGRTKQQILFFNGKADSITNNVQIKPSCRNLLLGRDDGKY
FQGQIDEVRLWKAAVNVTETYNKYPHTPSQLAHHYRFNTGKGSWLKDSKNPSKGIRLLRG
TKWVTSSLELKSTP
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacagcagagcgaaaaaactcatcctcgtgcgaatttttttccgtacagaaga
agcagcttggcggtgaaagatagaagagatgtctacatatctaacgagccgttagccgag
gaccagaatacgcaagagtttattgaacttccaagtgtcgcaaatgaaacgtcaaccact
gcgagtggcacgatgggcgagaaaatcctgagatggggtcggaaaggaaataaagtatct
caacaaccattgcaaaccggaaatacagaggtgtataatgatgatggtggtcccagtcca
ttcatccaaaaaggtgaaccccaggatgaaggccctgctagtgttgaagagaagaaaaga
agaagaaaatgtttgttctatatggtgttaactgttatcatcgctgtggtggtactcatc
atatcgataccagtaacagttaccgagatggccaaggcaacacaagccgaccgacttaaa
gttgggaacaaagacaactttacaccaatcacctcctgcaagggattccctgctaatcta
tcccatggtagtgttgtatgctctgggaataacataagcagttcttgtcagattgtatgt
gacagtggttatacattacaaagcaggtatactggggaatttatatgcacatctgatgga
ctatggaatggcactaatgggacttgcactccagtggaatgtggaattattcaggaatac
ctacaagggtcttcagtaggctgtcaaggtgtcaatactccattatgtactattggaatc
agccatggaagcttacagtgtaatgggtcaagacacagagacatgtgcgttataacatgt
gaaccaaactatgtacaaaatgcaagtaatccattgtgctttgctgatggatcgtggagt
gatttgaacatcggctgtgttgccaaggatccttgcctaatggggcaaaacgactgcaac
aaaattaatgggacatgcactgtggacgcaccaggaaaatacacatgcgcctgcaaactc
ggatttactggaaatggaattgagtgtggtcaggatgaggaccttgatggattcccagac
aaaaaactgccatgttacgaagcttcctgccaaggggataactgtccattaacacccaat
agcggccaggaagacaccgatagtgatggtgtaggtgatgcctgcgatgatgatgatgat
aatgatggtgtgcgtgacatccgcgataactgtcctttgatcagtaatcctgaacaaatg
gacacggaccaagacacaatcggagattcctgtgataattgtcccagggtctggaacaag
cgacagagggacgcgaatggtgatggtagaggggatgcgtgcacagctgacccagacgat
gatggaatcgagggtagccatgacaactgccctatgcattataaccctgagcagctagat
agggaccgcgatgggtttggggatacgtgtgataattgcccagctgtacctaataaccaa
agtgacaccaatcagaatctaatcggcgatgcgtgtgaaggcgtggacagtgatcatgac
ggcgtaattgacagggcagataactgtgtgtctgtcccaaatgcagatcaagtagatact
gattcagatggaatcggagatgcttgtgacagtgatacggatggggacggtgtttctgac
ggctctgataactgcaggcttgtacccaaccaagcacagagtgatgttgatggcgatggt
gtgggtgatgcttgtcagactgacgcagatggggatacagtcagtaatacgaaggatgac
tttgctgtggacaagtttaagaacaaaactgacttccggcgattcgaggaagttttactg
gatgacgagggaaactcgcaaccgcccccaaaatgggttatacgggacagtggacgcgag
gtggtgcagctacgaaacgggaacccaggtttgcttctgacttaccctcggtttgatcat
cttgtttataccgggacgttcttcatcagtgacagcctggatgatgactttgccggtata
gtgtttggttaccagagcaaccgaaatttctaccttgtgtcgtggaagcaaaagacgcag
acatacaatctgccgacgaacgcttcctacccaaggtcatgcgggcgtcagggtataagt
cttatggctgtgaattcaagtacaggcccaggcgtggagttgcgtgacgcgttatgggaa
acaggtaacacaatccaccaggcccagctcttgtggcacgaccctgctccggcctggcgt
ccttttactgcgtactggtggaagctggtccatgatccggacaccggacgaatacgtgtc
cgatggtatgagggttctcgcttgatctcagactctggtaacatcgagacgtccnngtat
cgcggaggacgtctcggcatgtatgtcttttcacagtctgacgtgtattactcggcgcta
gccacgcgcacaccgcagattactgattatgcgttgagttttgatggtcgtcatggttac
gtggagttgcctgcgctagaggacttcactgggagagacgacagctttaccgcggaggcc
tgggtctggactagtggaccagacggccccgtggtatgtgaccttcctcctatcgacttc
ggtacactgacattcaacacctccttcttgaagcagtcaacagacgacgacgatgactgg
aaactaagtaaccgtggcacgccaacatctagcacaggtcctgctgctgaccacaccacg
ggctcaggcttctacgcttttctagaagcttcgggaatcgctagagggaacagggcgtcg
tttgagactccatggtttctagcgtctgaagggtgtaacgtatcgtttttctaccacatg
tgggacggaagggcgtcccctactcagatgggctttctacaagttgacgtcagatccacg
cgggtcacgtggtggcaggtgttccagcggaagggaaaccatggcaacacgtggcaccaa
gctgtgttggatttatcgacaaacagtggcctgattgcagtccgcttcaccgcagttaaa
ggtgatggctacaaaagtgacgtggcccttgatgacgtcatctttagtgctgggtgtggg
tctcgcctggaatgccacaggactcccgagtttgcgccggttttcggtgacgaggacggc
gtaggtccccacctgtccataacaggtggccttgtgcaagggggcgtgtctcatgcaagt
agagctactgggcatgccacatttttatataaccgctggaaccatgtggctttgcagtac
aatggtcgcaccaaacagcagatactgttttttaatggtaaagctgatagtatcacaaac
aatgtccagattaaaccatcatgtaggaacttgcttcttggcagggatgatggcaaatat
ttccaaggccaaatagatgaggttcgtctttggaaagcagccgtgaatgtaacagaaaca
tataataaatacccacatactcctagtcaactagctcatcactacagattcaacacagga
aagggctcatggttaaaagacagcaaaaacccaagcaaaggtataaggctactgagaggc
acaaaatgggttacgtcatcactggaactcaaatcaacaccttga
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