Neodiprion virginianus: 124299157
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Entry
124299157 CDS
T09046
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124299157
Membrane trafficking [BR:
nvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124299157
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
124299157
NCBI-ProteinID:
XP_046608109
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All DBs
Position
2:42823327..42859411
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AA seq
2066 aa
AA seq
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MSLVVSIKNVQALKFKGEKFVKIDFRGATHCSRSLDENGDLIVVDQSFTWNLGRPVEESE
TLQLTVVSRGILRSEKTVAKYGLILQTVIQEGRILISDSLVDLSNRPLPAVVTLEVRYTP
PDGSCSSYAGTEIMEDEQRMLIDIEQNIATLERSLEANSMRRRGSWHSPAEKARKRGLGT
MQRGSSMSAAEGSPERKRSSTLKSVRSLMRLGKQRPPRDKSCDSNSESRGLLEQHDFSCT
SSNAVSRTNSMTSFELNPSDDSQVSGNDAENNSAKSLKRAQPKSGEVGQSALKAQDYQIC
VTVIEARQLAGLNMDPTVCVQVGDQRKYTSVKESTNCPYYNEYFVFDFHMPPIMLFDKII
TLSVQQSRNLLRPNLTLGSFKLDVATVWAQPDHQFYHKWALLTDPDDVAGGPKGYLKCDV
SVIGKGDSVKIPPKSEKDEDDIEGNLLLPDGVPIERQRARFVVKIYRADGLPKMNSSIMA
NVKKAFTGEAKDLVDPYVQVSFAGLCGKTSVKRNSYAPVWNEQIVFTEMFPPLCQRIKIQ
LRDNDPVHASVISTHFVDLKQVSNDGEKGFLPTFGPAFVHMYGSIRDYSLIDEHSTLNMG
LGEGISYRGRLLIAIRTEISDNVDMAPSGVEVEPTTPITESSYARNEEFFMFATIMDATM
IDKRLGDKPVYFEMSIGNAGNSLDGYNESSKVCEMSIQGGAGGSGDEDELQEVVTDSCQS
TTQPCKPMTHDKMYYFLPYWDNKPCLHVRSIWPDYRRRMYSSNIIGKIADKLEESLAQVM
SRVEDTTAEKCLKIAFEELSSNCNRYASISRSFTTGPGVGKTKLDKERSKLCQREIENIG
NMSRSLKATVTKSSFKERLKTAQTYLQRLRLLVDDPQDSLPDVFIWVVSSGKRVAYHRIQ
GRDLIYSIVDEECGRYCGKIQTMFLKLPGKKRFGPSGWAIQTKLQIYIWLGILKHKKYFI
QGLPKGYEVSHELKNVDRPRALPPSTIHYIRKHKFQLRAHMYQARSLIGSDASGLSDPFA
RVICGEFCRSTQVIDETLSPTWDELLLFDDILIYGTAEEIKNDPPSIIVELFDQDKVGKS
EYIGRAIARPHVKLASESYGPPQFPPSLEWYDVTRGVARAGELLAVFELLEHPSVKDYGF
PTLPDPKLRDLGLHQGNSSGLDTLGSILPVPIGIRPTLSKYRIEVLFWGLRDLKRVHLLT
VDKPRVDVECAGHILYSSVISNAKKNPNFSTPIKFMELELPEQELYRPPLTIRAVDCRSF
GRYTLVGTHTISSIHKYMHCPQTRYNPRDVEDRKRSPHHVQSFDQFKAKNQHTLLLDTFT
DNDSCNGDSIIKLGFELTDNWPTTKRDKTEQNVRRRHSLATNDSSGDLTALEDENGCQDW
WTKYFASIEAMIEENKEMLRKGKSLFPNQQNGTLLTYLDQDLASRGNATNSTGDKSPGIH
STRKLFGLRPTGNTTHLSSKLSPKHMSRNVCDTTALLKIYPNELEAQPEYEHFKEWLHTF
ELYRGKKMGDEPEDESRIVGSFKGALKVYKWPLPKDLVDHTGMSFDPQYGFFQGLPSNDP
IHVLVRVYIVKANDLHPCDLNGKADPYVVLQLGGKSISNKDSYVSKQLNPVFGKCFEIEA
TFPQDSLLTVQILDWDLVGSDDLIGETKIDLENRFYSRHRATCGLARKYDDSGYNKWRDA
LKPTQILSKLCKDGKLDGPSYTHGRVTIGRKNFTLSPDEMENYVHTKGMEEHLALAVLHQ
WSSFPRLGTTLVPEHVETRPLYNPDKPGIEQGKLEMWVDLFPMDMPLPGPPLDISPRKPK
SYELRIIIWNTDDVVLEDDAFFTGEKMSDIYVKGWLKGPEDCQCTDIHYRSLTGEGNFNW
RLIFPFDYLVAEEKIVINRKESLFSWDETECKIPARLELQVWDADHFSADDFLGAITLDL
NRFPRGAKNSKLCTLEMLKVDGSVPMVNIFKQKRIKGWWPFYVKKECEDMELTGKVEAEI
HLLTKEEAEKNPTGYGRNEPDPLDKPNRPDASFMWFLNPLKSIKYIVWHNYKWAILRIFV
LIAVALLVLLFFYAIPGYSVKKILGA
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgtggtgagcattaagaacgtccaagctctcaagttcaagggagaaaagttc
gtcaagatcgacttcagaggtgcgacacactgttctcgaagtctcgacgaaaacggagat
ctcattgtcgtagatcagagtttcacttggaatttgggaaggccggtggaggagtcggag
acgcttcagctgactgttgtctcccgagggattttgcgcagtgaaaaaacagtcgcgaaa
tacggtttaattcttcagactgtcattcaagaagggaggattctaatcagcgattcactc
gttgatctaagcaaccggccacttccggcagtcgttacactcgaggtgcgttacacaccc
ccggacggtagctgtagctcttatgccggtacagaaataatggaggatgaacaaaggatg
ctaatcgatattgagcaaaacattgcaactttggagcgaagcctcgaggcaaattccatg
agacgtcggggttcatggcacagccccgcagagaaggcaaggaagcgaggattaggaacc
atgcagcggggcagctccatgtctgcggcggaagggtcgccggaacggaaacggagttct
actctgaaaagcgtccgctccctcatgaggcttgggaagcagagaccaccgagagacaaa
tcatgcgacagtaactctgagtcacggggacttttggagcaacacgatttcagctgcact
tcgtcaaatgcagtttctcggacaaattcaatgacatcgtttgaattgaatccgtccgac
gacagccaggtcagtggcaacgacgcggaaaacaactcggcgaaatccttgaagagagcc
caacccaagagtggtgaagtgggacagagtgcccttaaagcccaagactatcagatttgc
gtgactgtcatagaagcgagacaactcgctggactcaacatggatccgacggtttgcgtc
caagtcggtgaccaacggaaatacactagtgtcaaagagtccacgaactgtccctattac
aatgagtatttcgtgttcgacttccacatgccgccgattatgctgtttgacaagattatc
actttatcggtgcagcaatcgcggaaccttctacgtcctaatctaacactgggcagcttt
aagttagatgtagccaccgtctgggctcagccagatcatcaattctatcacaagtgggca
ctgcttactgaccccgacgacgtcgccggagggccaaagggatatctgaaatgcgacgtc
agtgtgattgggaaaggggactcggtcaagataccgccgaagagtgaaaaggacgaggac
gacatcgaagggaatctgctgctgccggacggtgtgccgattgaacgacagcgagccaga
tttgtggtaaaaatttacagagctgacggtctaccaaagatgaacagcagtataatggct
aatgtgaagaaggcatttactggcgaggcaaaagatttggtcgacccctacgtgcaagtc
tcctttgccggactctgcggtaaaacaagcgtaaaacgcaacagttacgcacctgtgtgg
aacgaacagatagtttttaccgaaatgtttccgcctctgtgccagcgcatcaagattcaa
ctccgcgacaacgacccggttcatgcatctgtaatcagcacccatttcgtcgatctcaag
caagtgagcaacgacggtgagaagggtttcctaccaactttcgggccagctttcgtccac
atgtacggtagcatcagagattatagtctcatcgacgaacattcaactttgaacatgggt
ttgggcgaaggaatatcttacagaggaagacttctaatagccatcagaactgaaataagt
gacaacgttgacatggcgccgtcaggtgttgaagttgagccgacgacaccgataaccgag
tcgtcttatgcccggaacgaggagtttttcatgttcgcgaccattatggacgcgacgatg
attgataagagactcggggataaaccggtgtactttgaaatgtcaattgggaacgctggg
aactcgttggatggatacaatgaaagctctaaggtttgtgaaatgagcattcaaggcggt
gctggcggaagcggagacgaggatgagcttcaagaagtcgttacagattcttgtcaaagt
acaacgcagccgtgcaagccaatgacccacgacaaaatgtattatttcctaccttactgg
gacaacaagccctgcctacacgtgcgcagcatttggcccgactatcgccgaagaatgtac
agcagcaacataatcgggaaaatagcggataaactggaagaaagcctagcccaagtgatg
tcacgcgtcgaggatactactgccgagaaatgcttgaaaattgctttcgaggaattgagc
agcaattgtaatcggtacgccagcatcagtagatctttcaccaccggaccgggtgttggc
aaaacgaaactggacaaagagaggtcgaagctgtgtcaaagggagattgaaaatattggg
aacatgtcaaggagcttaaaggctacggtcaccaagagtagcttcaaggaaagactcaag
actgcccaaacttacttgcaaagactcaggctactcgttgacgacccccaagattcacta
ccggatgtcttcatatgggttgtaagttctggaaaacgagtagcctatcacagaattcag
ggaagagatttaatctattccatcgtagacgaagaatgcggccggtactgcggcaagatt
caaactatgtttttaaagctgcctggaaagaagagattcggcccatccggatgggcaatt
cagacaaaattacaaatatacatctggctcggtatattgaagcacaagaagtattttata
caggggctacccaagggttatgaagtcagtcacgaactgaaaaacgtcgacaggccgcga
gccctgcctccgtcaacgatccattatattcgaaaacacaaattccaattgagggcacac
atgtaccaagcaaggtcactcattggtagcgacgcttcggggctgtccgatcccttcgcc
cgagtcatttgtggcgagttctgtaggtcaacacaggtaatcgacgaaaccttaagtcca
acgtgggacgaacttctgctctttgatgacatattgatatacggaacggccgaagaaata
aaaaacgatccaccctcgattatcgttgagctgttcgatcaggacaaagtgggaaagtcg
gagtacatcggcagagcgatagctcgaccccatgtgaaattagcttcagagtcgtacggt
ccgcctcagttcccaccgtcgttggaatggtacgacgtgacgagaggggtcgccagagcc
ggcgagttgctcgctgtgttcgaactcctggagcatccgtcggtgaaggattatgggttc
cccacgctccctgaccccaagctccgagatcttggtcttcatcaaggaaactcatctggc
ctcgatacgttaggatcaattcttcccgttcccatcggcatcaggcctaccctctcgaaa
tacagaatcgaggttctcttctggggacttcgtgatctgaagcgagtacacttgctaacg
gtcgacaaacctcgcgtcgacgttgagtgtgccggtcacatactttactcgtcagtaatt
tcaaacgcaaagaaaaatccaaatttcagcacgcccataaaatttatggaactggagctt
cccgagcaagagctctaccgtccgccactgacaattcgtgctgttgactgtcggagtttt
ggtagatacaccctcgttggaacgcacacaataagctccattcacaaatacatgcattgt
ccgcaaacaaggtataacccgagagacgtcgaggacaggaaaagaagtcctcatcacgta
caatcgttcgaccagttcaaggcaaagaaccagcataccctgcttttagatacgtttacg
gacaacgattcatgcaacggtgattcgattatcaagctgggattcgagctaaccgataat
tggcctacaacgaagcgggacaaaactgagcagaatgttcgtcggaggcacagtttggcc
accaacgatagctcaggtgatttgacggcccttgaagacgagaatggctgccaggattgg
tggaccaaatattttgcgtcaatcgaggcaatgattgaggagaacaaagagatgttacgg
aaaggaaagtcattattcccgaaccagcagaacggcacacttctgacatatttggaccaa
gaccttgcatctcgcggtaacgcgactaattctacaggtgacaagagcccaggtattcac
tcgacgaggaagcttttcggtttgcggcccacgggaaacacgacgcatctttcttcaaaa
ttaagccccaagcacatgtctcggaacgtatgcgatacaacggcattgttgaaaatctat
cctaacgaactcgaagcacagcctgagtatgaacatttcaaggagtggttgcacactttt
gaattgtacagaggtaaaaagatgggtgacgaacccgaggacgagtcacgaatcgttggt
agcttcaaaggagctttgaaggtttataagtggccactgccaaaagatctcgtggatcat
accgggatgagttttgatccgcaatacggcttctttcagggattgccctcgaacgatcct
atacacgttctggtcagggtatacatagtcaaagcaaatgacctgcatccctgcgatttg
aacggcaaagccgatccctacgttgttctgcagcttggcggcaagagcatcagcaacaag
gatagctacgtatcaaagcaattgaacccagtattcggaaagtgtttcgaaattgaagct
acctttccgcaggactcacttctcacggtacagatattggactgggatctggttggatca
gatgatctaatcggggagactaagattgacttggaaaatcggttctacagcaggcatcgt
gctacgtgcggactagcaaggaaatacgacgactccggttacaacaagtggcgagacgct
cttaaaccaacgcaaatactgtcgaagctctgcaaagatgggaaattggacggtccatct
tacacccacggacgagtaacaatcggacgtaaaaatttcacgctgtctcctgacgaaatg
gagaattatgtccatacaaaaggcatggaggaacatctcgccttggcagtcctacatcag
tggagctcgtttcctcgactaggtactacgttggtaccggagcacgtagaaacacgcccg
ttgtacaatcctgacaaacctggcattgagcagggtaagctcgagatgtgggtggatcta
tttccgatggacatgcctctgcctggcccaccgttggacatttccccaaggaaaccaaaa
agttatgagctgagaattattatctggaatacggacgacgtcgtcttggaggacgacgcg
ttttttaccggtgaaaaaatgagcgacatttatgttaagggatggctgaaagggccagaa
gattgccagtgcacagatattcattatagatcgttaaccggcgagggcaattttaactgg
cggttgatatttccatttgactaccttgtagccgaggaaaagattgtcatcaaccgaaag
gagagtttgttcagttgggacgaaacggaatgtaaaataccggcacgattggaattacag
gtgtgggatgcggatcatttctcggctgatgattttcttggagcaatcacgttggacttg
aatcgatttccacggggcgcgaagaacagtaagctgtgcaccttggaaatgttgaaagtg
gatggatctgtgccgatggtcaatatattcaagcagaagcgtatcaaaggatggtggcct
ttttacgtgaagaaggaatgtgaggacatggaattaacgggaaaagttgaagctgaaata
catttactaacaaaagaagaggctgagaaaaatcctaccggttacggaagaaacgaaccg
gaccctctcgacaagccaaatcggccggacgcttcatttatgtggtttctgaatcctctt
aagtctatcaagtatatcgtatggcacaactacaagtgggcaatactccgaattttcgta
ctcattgccgtagctttgttggttctcctttttttctacgctatccctggatattcagtg
aaaaaaattttaggcgcttaa
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integrated database retrieval system
