Nicrophorus vespilloides (burying beetle): 108566495
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Entry
108566495 CDS
T04922
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108566495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108566495
Spliceosome [BR:
nvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108566495
Complex C
U5 SnRNP specific factors
108566495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Tobravirus_2B
TsaE
Motif
Other DBs
NCBI-GeneID:
108566495
NCBI-ProteinID:
XP_017781889
UniProt:
A0ABM1N4Y9
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDEDDDEEHETFQDEEEHQDYDDDRMEDAEPQPMAIVLHEDK
NYYPSSLQVYGPDVETIVQEEDAQPLDVPLIEPVKKKKFQLKEQDLPDTTYSMEFLADMM
DNTSLIRNVALVGHLHHGKTTFVDGLVRQTHPSHQDYEEKNLRYTDTLFTEQERGCSIKS
IPVTLLLPDIKNKNYLMNVFDTPGHVNFSDEVTAAMRLCDGVVLFVDAAEGVMLNTERLL
KHAVQERMQITICINKIDRLILELKLPPQDAYYKLRHIVEEINGLLTLYSDDVNPHIVSP
VLGNVCFASSQYGVCFTLKSFASIYYQYYGDVNVEEFSKRLWGDIYFNSKNRKFTKKAPH
NSAQRSFVEFILEPLYKIFAQVVGDVDTTLPAVLDELGIKLNKQELKLNIRPLLRLVCNR
FLGDFSGFVNMCVEHINSPLDNAKTKIDHIYTGPNTSKLYDDMSNCNQDGLLMVHSSKMY
PTEDCTFFQVLGRVMSGTLHAGTDVRVLGENYTLQDEEDSRVLTVGRLWIYEARYKVELN
RVPAGNWVLIEGIDQSIVKTATITDLVIHDDLYIFRPLKFNTQSIIKIAVEPVNPSELPK
MLDGLRKVNKSYPLLTTRVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVAF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENENVQINWNKKKLGEFFQSKY
DWDLLAARSIWTFGPDTTGPNILVDDTLPSEVDKGLLNSVKDSIVQGFQWGTREGPLCEE
PIRNTKFKILDAVIANEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYLFVEVQAPADC
VSSVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFH
HWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSQDVSINKFFDDPMLLELA
RQDVVLNYPLL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatctatacgacgagtttggtaattacattggtcctgagctggacagcgat
gaagatgatgatgaggaacatgaaaccttccaggacgaagaagaacatcaagattatgat
gatgatcgcatggaagatgctgagcctcaacccatggcaattgttttgcacgaggataaa
aactattacccgtcatccctgcaagtgtatggtcctgacgtggaaactatagttcaagag
gaagatgctcaacctttagacgttcctttgattgaaccagtcaagaaaaagaagtttcaa
ttgaaagagcaggatttgccagacaccacctacagcatggagtttttagccgatatgatg
gataacacttcattgattcgaaacgtggctttggtaggtcatctgcatcacggaaaaact
acttttgtagatggtttagtgaggcaaactcatccgagtcatcaagattatgaagagaag
aacttgagatacacagacactttgttcactgaacaagagcgcggatgctccatcaaatcc
atcccggtgacgttacttctacccgacattaaaaacaagaattatttaatgaacgtcttc
gatactccaggtcatgtgaacttttctgatgaagtaactgcagcaatgcgtctctgcgat
ggagttgtgctgtttgttgatgcagctgaaggagtcatgttgaacactgagagactcttg
aaacacgcggtgcaagagcgcatgcagattaccatttgcatcaacaaaattgatagactc
atactcgaattgaagcttccaccgcaagacgcttattacaaattgaggcacatcgtcgaa
gaaatcaacggattgttaactttatactcggacgatgtaaatccgcacatcgtgtctccg
gttttgggtaacgtgtgcttcgccagttctcaatacggagtttgcttcactttgaaatcg
tttgctagcatttactaccaatattacggtgatgtcaacgtcgaggagttttccaagcgg
ctttggggtgatatttatttcaactcgaaaaatcgtaaatttacaaagaaggctcctcat
aattcggcgcaaagaagcttcgtcgaattcatattggaacctctttacaaaatcttcgct
caagttgtcggcgatgttgatacgactttaccagcggtattggatgagttaggcattaaa
ctgaataagcaagagttgaaattgaatattagaccgttgctgagattggtttgcaaccgg
tttttgggcgatttcagcggttttgtgaacatgtgcgtggaacacatcaattcgcctttg
gataacgcgaaaaccaaaatcgatcacatctacacaggtccaaatacgagtaaactgtac
gacgatatgtccaattgcaatcaagacggtttgctaatggtgcacagctcgaaaatgtac
cctaccgaagattgcaccttcttccaggttctaggtagagtgatgagcggaactctgcac
gctggaacagatgttagggttttgggagagaattacaccttgcaggacgaggaggattcc
agggttttaactgtaggtcgactgtggatttacgaggcgcgctacaaagttgaactgaac
agagttccggctggtaactgggttctcatagaaggcatcgatcaatcgatagtgaaaaca
gcgacgatcactgatttagttatacacgacgatttgtacattttcagaccgctgaaattc
aacacgcaaagcatcattaagatagccgtagaacccgtcaatccttcagaacttccgaag
atgttggacgggttaagaaaagtgaacaaatcttatccactattaacaacgagagttgaa
gaatctggagagcacgtggttttgggaactggggaattgtacttggattgcgtcatgcac
gatcttaggaagatgtattcggagatcgatatcaaagttgcggatccggtcgtcgccttc
tgcgaaaccgtcgtggaaacttcgagtttaaaatgtttcgccgagactccgaataaaaag
aacaaaatcacgatgattgccgagcctttggagaagggtttggctgaagatatagagaac
gagaacgtgcagatcaattggaataaaaagaagttgggtgagttcttccaatcgaaatat
gattgggatttgcttgcggcgcgtagcatttggaccttcggccctgacaccacgggtcct
aacattttggtcgacgatactctaccgtcggaggtggacaaaggtttgctgaacagcgtc
aaagattcgatagtgcaaggtttccaatggggaacgagggaaggaccgctgtgcgaggag
ccgattaggaatacgaaatttaaaattttggatgctgtgattgctaacgaacctctgcac
agaggcggaggacagattataccgacggctagaagggttgtctactctgcattcttgatg
gcaacgccgaggcttatggaaccgtacctcttcgtcgaggttcaagcacctgcagattgc
gtgtcctcggtttacacggttttggctaaacggagaggacacgtcactcaggacgctcca
gttcccggttcacccctgtacacgatcaaagcgttcattccagctatagacagcttcggt
ttcgagaccgatttgaggacgcacacgcaaggacaagccttctgcctttcagttttccac
cattggcagattgttcccggagatccgctcgataagagcatagttatcagaccgctggaa
ccacaacctgccacacatttagcgagggaattcatgataaaaacgcgcagaaggaaaggc
ctgagtcaggacgtttccattaacaagttcttcgacgatcctatgttgttagaattggcc
aggcaggatgttgtgttgaactatcctctactttaa
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