Neogale vison (American mink): 122890136
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Entry
122890136 CDS
T08764
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04360
Axon guidance
nvs05017
Spinocerebellar ataxia
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122890136 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122890136 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
122890136 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122890136 (TRPC3)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122890136 (TRPC3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
122890136
NCBI-ProteinID:
XP_044081799
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All DBs
Position
11:88581237..88633129
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AA seq
864 aa
AA seq
DB search
MEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAEYGNIPVVRKMLE
ESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEA
ILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLL
MKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALE
LSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESTEPLELH
RHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGL
PFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNITVI
DYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIF
IAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEG
LYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYS
YYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVV
VLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFV
MRIINFSKCRRSRLQKDIEMGMGNSKSRFTKCFAVYLSLMQHRELNLFTQSNSRVFESHS
FNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQ
ATEELAVLIHKLSEKLNPSMPRCE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagcccatctctgaggcgcaagacggtgatgcgggagaagggccggcgccag
gcagtccggggcccggctttcatgtttaatgaccggggcacgagccttaccgccgaggag
gagcgctttctggacgctgcggagtatggcaacatccctgtggtgcgcaagatgctggag
gagtccaagacgctgaacgtcaactgtgtggactacatgggccagaacgcgctgcagctg
gccgtgggcaacgagcacctggaggtgacggagctgctgctcaagaaggagaacctggcg
cgaatcggcgatgccctgctgcttgccatcagcaagggctacgtgcgcatcgtggaagcc
atcctgaaccaccccggcttcgcggccagcaagcgcctgaccctgagtccctgtgagcag
gagctccaggacgacgacttctacgcctacgacgaggacggcacgcgcttctcgcccgac
atcacgcccatcatcctggcggcgcactgccagaagtacgaggtggtgcacatgctgctg
atgaagggcgccaggatcgagcggccgcacgactatttctgcaagtgcggagactgcatg
gagaagcagaggcacgactctttcagccactcacgctcgaggatcaatgcctacaagggg
ctggcaagccccgcgtacctgtccttgtctagcgaggacccggtgctcaccgccctggag
ctcagcaacgagctggccaagctagccaacatagagaaggagttcaagaatgactatcgg
aagctctccatgcaatgcaaagactttgtggtgggtgtgttggatctttgccgggactca
gaagaagtagaagctattctgaatggagatcttgaatccacagagcctctagagctacac
aggcataaagcttccctgagtcgtgtcaagcttgctattaagtatgaagtgaaaaagttt
gtggctcaccccaactgccagcagcagctcttgacaatctggtacgagaacctctcaggc
ctgagggaacagaccatagctatcaagtgtctggttgtgctggttgtggccttgggcctc
ccatttctcgccattggctactggatcgcaccatgcagcaggctggggaaaattctgcga
agcccttttatgaagtttgttgcacatgctgcttctttcatcatcttcctgggcctgctt
gtgttcaatgcctcagacagattcgaaggcatcaccacactgcccaatatcactgttatt
gactatcccaagcagatcttcagggtgaaaaccacccagttcacgtggacagagatgcta
attatggtctgggttctcggaatgatgtggtctgagtgtaaggagctctggctggaagga
cctagggaatatattttgcagttgtggaatgtgctggacttcgggatgctctccatcttc
attgctgctttcacggccagattcctagctttccttcaggcaacaaaagcacagcagtat
gtggacagttatgtccaagagagcgacctcagtgaagttacacttccaccggagatccag
tatttcacttacgccagagataaatggctcccttctgaccctcagatcatatctgaaggc
ctatatgctatagctgttgtgctcagcttctctcggattgcgtatatccttcctgcaaat
gagagctttggccccttgcagatctctcttggaaggactgtgaaggacattttcaagttc
atggtcctctttattatggtgtttcttgcctttatgattggcatgttcatactgtattct
tactaccttggagctaaagtaaatgctgcttttaccactgtagaagaaagtttcaagact
ttgttttggtcgatatttggattgtctgaagtcacttccgttgtgctcaaatacgatcac
aaattcatagagaatattggatacgttctttatggaatatacaatgtaactatggtggtt
gttttactcaacatgttaattgctatgattaatagctcatatcaagaaattgaggatgac
agtgatgtagaatggaagtttgcccgttcaaaactttggttatcttattttgatgatgga
aaaacattacctccacctttcagtctagttcctagtccgaagtcatttgtttatttcgtc
atgcggatcattaacttttccaaatgcaggaggagccggctgcagaaggatatagaaatg
ggaatgggtaactccaagtccaggtttacaaagtgctttgctgtatacttgagcctcatg
caacaccgtgagttaaacctcttcactcagtctaactcaagagtttttgaatcacacagt
tttaacagcattctcaaccaaccaacacgttatcagcagataatgaaaagacttataaag
cgatatgttctgaaagcacaagtggacaaagaaaatgatgaagttaatgaaggtgaatta
aaagaaatcaagcaagatatctccagccttcgttatgaacttttagaggacaagagccaa
gcaactgaggaattagccgttctgattcataaactcagtgagaaactgaatcctagcatg
ccgagatgtgaatga
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