Neogale vison (American mink): 122891456
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Entry
122891456 CDS
T08764
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122891456 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122891456 (TDG)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
122891456 (TDG)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122891456 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
122891456
NCBI-ProteinID:
XP_044083051
UniProt:
U6CQF6
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Position
12:complement(17761795..17787652)
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AA seq
406 aa
AA seq
DB search
MEAENAGSYSLQQAQAFYTFPFQHMMAEAPDGAVVSEQHMPAEVPDPAPAQEPAQETPKG
RKRKPRATEPKKPVEPKKPAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYTENPCAGDPCSFSS
GGLADSAESTFGDIPNGQWMTQSFTDQIPSFNNHCGTPEQEEGSRA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcgggcagctattcccttcagcaagctcaagctttttatacgttc
ccgtttcaacacatgatggctgaagctcctgatggggccgtggtgagcgaacagcacatg
ccagcagaagttccagatcccgctcctgctcaggagcctgcacaagagactccaaaagga
aggaaaagaaaacccagagcaacagaaccaaaaaaaccagtagaacccaaaaagcctgct
gaggccaaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagac
acatttaaagtgaaaagaaaagtagaccgttttaatggtgtttcagaagctgaacttcta
accaagaccctcccagacattttgaccttcaacctggacattgtgattattggcataaac
ccaggactaatggcagcttacaaagggcatcattaccctggacctggaaaccatttttgg
aagtgtctatttatgtccggcctgagtgaggtccagctgaaccatatggatgatcacact
ttaccggggaaatacggtattggatttaccaatatggtggaaaggacaacaccaggcagc
aaagatctctccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagttaaggttaaaaacttagaatttggacttcaaccccataagatccca
gacacagaaactctctgctatgttatgccgtcatccagtgcgagatgtgctcaatttcct
cgagcccaggacaaagttcattactacattaagctcaaagacttgagagatcaattgaaa
ggcattgaacgaaacacagacgttcaagaggtgcaatatacattcgatctgcagctggcc
caagaggatgcaaagaagatggctgttaaggaagaaaaatacgacccaggttatgaagca
gcgtatggcggtgcttatacagaaaatccgtgtgctggcgacccctgcagcttctcctcc
ggggggctagcggacagtgcagaatcaactttcggtgacattccaaatgggcagtggatg
acccagtcgtttacagaccagattccttcctttaataatcactgtgggacgccagaacag
gaagaaggaagccgcgcttga
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