Neogale vison (American mink): 122892028
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Entry
122892028 CDS
T08764
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04015
Rap1 signaling pathway
nvs04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
122892028 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122892028 (RAPGEF6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
122892028
NCBI-ProteinID:
XP_044084075
LinkDB
All DBs
Position
1:246907181..247100892
Genome browser
AA seq
1618 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETVARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHITDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLMEFMHQLPAFANMTMSVRRELCTVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEITHPDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLQSPLDVGIKLLEWFKIDNLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPSSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGIPHIPKIAEKKSNRHSIQDVPGDIEHTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFRRLFCDGGLSQSQDDSIVGTRHCRHSL
AIMPIPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEV
VCHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMET
ETLCSDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTG
NTHLKEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISG
LNLASVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVV
KKDMTFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGS
LSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVDTDEEKFQ
MMSLQWEPAYGTLTKNLSEKRSAKLSEMSPVPMRSAGQTAKAHLHQPHRVSQVLQVPAVN
LHPIRKKGQAKDPAALNTNLPQKVLGTTEEISGKKHPEDTISVASSLHSSPPASPQGSPR
KGYTLTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERCSSQPVAVPESTGPL
EKTEHSSEIGDHTQLGPGWALSKPSLVKSLAVSSSMSNEEISHEHVILEAADSGRGSWTS
CSSSSHDNFQSLPNPKGWDFLNAYRHTHLDGPIAEVELPDCEPYSCPKGCSRTCGQCKGN
LETNQMRQSWASSSSLSDTYEPNYGTVKRRVLESIASESSEGLEPKDGTDPVYKTVTSST
EKGLIVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPYLHLKPPDYSVAVQRSKMMH
DSLSRLPSASLGSSPVACVPSKIVTQPQRQILQPSHPKLADVTDADSEADENEQVSAV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccccggcgctaggcaggcgctgaagaagaagcctcccgagcgg
acccccgaggatttaaatactatctattcttaccttcatggaatggaaatactatcaaat
ctcagggaacatcagctcagattaatgtctgcaagagcacgctatgagagatacagtggc
aatcaaattcttttttgttcagaaactgttgccagatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtggagaat
tccaaagataatgaagatagtattctacaaagagaaatacctgccagacaatctcgacga
aggtttcggaaaattaattataaaggagagcgtcaaactattactgatgatgtggacatt
aacagctatctttctcttccggccgatcttaccaagatgcacatcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagcatcgccagtgactctggg
agcagcagtttatctgatatctatcaggctacggaaagtgaagtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagagatt
gatcgaacagatccactgcagggacgagatcttgttcgagaatgtcttgagaaagaacct
gcagacaaaactgatgatgatattgaacaattaatggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgcacagtgatgatttttgaagtg
gtcgaacaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaatcactcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggataagcagtacatgcatggagttgttaga
actaaagtagatgattgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgtggagaagaatacccataaagttgaggaagagggagaaattgttatggtacat
gagcatcgtgaactagatcggagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttaatagaagaacattctattgtggacccaacttatata
gaagatttcctactaacttacaggacatttcttcaaagtcctttggatgttgggatcaaa
ctattggaatggtttaaaattgacaacttacgggataaggtaacacggattgtgttatta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcatctccggttattaaatatt
gcctgtgctgcaaaggccaagtggagacaggtggtgttgcagaaggcttcccgagagtcc
cctctgcatttcagtcttaatggagggagtgagaaggggtttggtattttcgttgaagga
gtagaacctagtagcaaagctgctgatgctggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgaaaatattacatttgtgaaggcccttgaaattctaaggaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagagttacttagt
aggactgaacaagaaaaatctggtattcctcatattcctaaaattgctgaaaaaaaaagt
aatcgccattcaatccaggatgtaccaggagatattgaacacacatcacaggagaaagga
aataagaaaataaaagcaaacactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacggtttagtatcttacctccaaaactgtttaggagactgttttgtgacgga
ggcctgagccaatcacaggacgacagcattgtgggaacaagacactgcaggcacagtctg
gctataatgcctattcctggaacactctcatctagcagccctgatctcctgcaaccgacc
accagcatgttggatttttctaatccttcagatattcctgatcaagttataagagttttc
aaagcagatcaacagagttgctacattatcatcagtaaagacactacagctaaagaagtt
gtttgtcatgctgttcatgaatttggtttgacgggtgcgtccgacacatattctctctgt
gaagtttctgttactcctgagggtgtcataaaacagagaagacttccagaccagttctcc
aaattagctgatagaattcagctcaatggaaggtattatttaaaaaataacatggaaaca
gaaaccttatgttcagatgaagatgctcaagaactagttaaggaaagccagctctccatg
ctgcagctcagtaccattgaggtggccactcagctgtcaatgagggacttcgatttgttt
cgtaatattgagcctactgaatacattgatgacctttttaaattagattccaaaacagga
aatactcacttgaaagagtttgaggacattgttaaccaggagacattctgggttgcctca
gagattttaactgaatccaatcagctgaaacgaatgaagattattaagcattttattaaa
attgctcttcattgtcgagaatgtaagaacttcaattccatgtttgccataataagtggc
ctgaacctggcatctgtagcacgactcagaggtacttgggaaaaattaccaagcaagtat
gagaaacacctccaagatctacaagacctttttgatccatctagaaacatggcaaaatac
agaaatattcttagtagtcaaagcatgcagcctccaattattccactcttccctgttgtc
aagaaagatatgacatttctccatgaaggaaatgactccaaagtagatggtttagtgaat
tttgagaagctaagaatgattgccaaagaaatccgccaagttgttcgaatgacttctgct
aacatggacccagctatgatgtttcggcagaggaagaagaggtggcggagtctggggtca
ctgagtcaaggcagcacaaactcaaacatgctggatgttcagggaggtgcacacaaaaaa
agggcacgtcgcagctctctgcttaacgccaagaagctatacgaggatgcccaaatggca
agaaaagtgaagcagtatctttccagtctggatgtagacacagatgaggaaaagtttcag
atgatgtcattgcagtgggaacctgcctatggtaccttgaccaagaatttaagtgagaaa
agatcagccaaattgtcagaaatgtctccagtgcctatgagatcggcaggtcaaacagct
aaagcccatttgcatcagccccaccgagtaagccaggtgctccaagtgccagctgttaat
ttgcaccccatcaggaagaagggacaagccaaagaccctgccgcattaaatacaaattta
cctcagaaagttttaggaacaactgaagaaataagtggtaaaaaacatccagaagacact
atctctgtagcatcatctttacattctagtcctcctgcatctcctcaaggttcccctcgc
aaaggttatacacttacaccgtcagctaaatctgacaacttgtctgactccagccatagt
gaaatttcttcacgatccagcatcgtgagcaattgttctgttgactccatgtctacagct
ctgcaggatgaacgatgttcttcacagcctgtggcggtccctgaatccactgggcctttg
gaaaagactgaacactcctcagagataggagatcatactcagcttggccctgggtgggcg
ctgtcaaaaccatctcttgtcaagagtttagctgtctcctcttctatgagtaatgaagag
atttcccatgagcatgtcattttagaagcagcagatagtggtcgtggaagttggacttcc
tgttcaagcagttcccatgacaacttccaaagccttccaaacccaaaaggctgggatttt
ttaaatgcttatcgacatacccatttggatggccccattgctgaagttgaactacctgac
tgtgagccctattcctgccctaaaggctgctctagaacttgtggtcagtgtaaaggaaac
ctagagactaatcagatgagacagagttgggcctcctccagttctctgtctgacacatat
gaaccaaactatggaacagttaaacggagagtgttggagagcatcgcatctgagtcctct
gaaggcttggaacccaaggatggcactgatccagtttataaaactgttacttcaagtaca
gaaaagggcctgattgtgtactgtgtcacctcacccaagaaggaggataggtatagggag
ccacctcccactcctccaggatacatggggatttctttagcggacctaaaagaaggaccc
tacctacacctaaaacctccagattatagtgtggcagtgcagaggtcaaagatgatgcat
gacagcctctctagactgccatcagcctccctcggtagcagccccgtggcctgtgttccg
tcgaagattgtaactcagcctcagaggcagattttgcagccgtcccatcctaagctagca
gatgtgactgatgcagatagcgaagcagatgaaaatgaacaggtctcagcagtgtag
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integrated database retrieval system
