Neogale vison (American mink): 122896345
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Entry
122896345 CDS
T08764
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04360
Axon guidance
nvs04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122896345 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
122896345 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122896345 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122896345 (TRPC5)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122896345 (TRPC5)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122896345 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
122896345
NCBI-ProteinID:
XP_044090391
UniProt:
A0A8C7ALA6
LinkDB
All DBs
Position
X:36298059..36436985
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHSRRSFSASSTELSQ
RDDANDGSGGARAKSKSVSFNLGYKKKACHGPPLIRTMPRAGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIAQQHYMWQDIRYSQMEKGKAGACSQSEI
NLSEVELGDARGAAESSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactatactacaaaaaagtcaactattcaccatacagagatcgtatccccctg
caaattgtgagggctgagactgagctctctgcagaagagaaggctttcctcaatgctgtg
gagaagggggactatgccaccgtgaagcaggccctacaggaggctgagatttactacaat
gtcaacatcaactgcatggatcctctgggccggagtgccctgcttattgccattgagaat
gagaacttggaaattatggagcttctactgaaccacagtgtatatgtaggtgatgcattg
ctctatgccatccgcaaggaagtggtgggcgctgtggagcttctgctcagctaccggcgg
ccaagtggagagaagcaggtccccaccctgatgatggatacccagttctctgagttcaca
ccagacatcactcccatcatgctggctgcccacaccaacaactacgagatcatcaaattg
cttgtccaaaaacgagtcacaatcccacggccccaccagatccgctgtaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccattcccgctcccggctgaacatctat
aaagcgctagcaagcccctcactcattgccttgtcaagtgaggaccctatcctaactgcc
ttccgtctgggctgggagctcaaggagctcagcaaggtggaaaatgaattcaaggccgag
tatgaggagctctcccaacagtgcaaactctttgccaaagacctgttggaccaagctcgg
agctcccgggaattggaaatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgtcgctcagcctaattgccaacagttacttgccaccctgtggtatgacggcttccct
ggatggcgacggaaacactgggtagtcaagctgcttacctgcatgaccattgggttcctg
tttcccatgctgtctatagcttacctgatctcacccagaagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcatatctgaccttccttttcatg
cttctcctggcttctcagcatatcgttaggacagaccttcatgttcaggggcctccccca
actgtcgtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatatatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttcattgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgaccctgattgcagaagcg
ctctttgcaatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttaggacctctgcagatctctttggggcgcatgctgcttgatatcctcaaattc
ctctttatctactgcctagtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcgatcgatgagccaaacaactgcaagggaatccgatgtgagaaa
cagaataatgccttctccacgctcttcgaaaccctccagtcgctcttctggtctgtcttt
ggccttttaaatctctatgtcaccaatgtaaaagccagacacgagttcacagagtttgtg
ggagctaccatgtttgggacatacaacgtcatctccctagttgtgctgctgaacatgctg
attgccatgatgaacaactcctaccagctcattgccgatcatgccgatattgagtggaag
tttgcaaggacaaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagtcccaagtcatttctctaccttggtaactggtttaacaacacc
ttctgccccaaaagagaccctgatggtagacggagaaggcacaacttgagaagcttcacg
gaacgccatgctgacagcctgatacagaatcaacattatcaggaagtcatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaacgagggactaacagaa
gaaaattttaaggaattaaagcaggacatttccagctttcgatatgaagtacttgacctc
ttaggaaacaggaaacactcaaggagaagcttttccgcgagcagcactgaactctctcag
agggatgatgccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aacttgggctacaagaaaaaggcctgccacgggccacctctcatcagaaccatgccaaga
gccgggggtgcccaagggaagtcaaaagctgagtcatcaagtaaacggtccttcatgggt
ccttctctcaagaaactcggtctcctgttctccaaatttaatggtcatatgtctgaaccc
agttcagagccaatgtacaccatttcggatggcatcgctcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcaggggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgacgcccggggtgctgctgagagcagtgaatgcccc
ctagcctgttctagctctctccactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgcgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaacgcggctctaa
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