Neogale vison (American mink): 122899318
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Entry
122899318 CDS
T08764
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04512
ECM-receptor interaction
nvs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122899318 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122899318 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nvs00535
]
122899318 (AGRN)
Proteoglycans [BR:
nvs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122899318 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
122899318
NCBI-ProteinID:
XP_044092809
LinkDB
All DBs
Position
2:218200..251368
Genome browser
AA seq
2067 aa
AA seq
DB search
MPSLWPSGWAPLQPLLLLLVVAARALPSADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSSKVRVWRYLKGKDMVTQESLLDGGSKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEDVEHCVEDKPGTHFTPASPVPLDACRGMLCG
FGAVCEPSAEGSGRASCVCKKSACPAVVAPVCGSDASTYSNECELHRAQCSQQRRIRLLS
RGPCGSRDPCANVTCSFGSTCVRSADGQTASCLCPAACQGPPDGPVCGSDGADYPSQCGL
LRHACARQENIFKKFDGPCDPCQGARSDPSRVCRVNPRTRRPEMLLRPESCPARREPVCG
DDGVTYDNECVMGRTGAARGLLLQKVRSGQCQPQDRCPDVCRFGAVCLSRRGRPRCSCDR
VVCDGAYRPVCAGDGHTYDSDCQRRQAECRQQRLIPAKHQGPCDQPLSPCLGVHCPFGAS
CAVKNGEAECVCQQACPGIYDPMCGTDGVTYGSTCELEATACALGREIRVARRGPCDRCG
QCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYASECELHVHACTHQISLHVVSAGH
CQTCGGEVCAFGAVCLAGRCVCPRCEQPPPGPVCGSDGVTYDSACHLREAACQQQTQIEE
ARAGPCEQAECGSGGSGSGEDGECERELCRQRGGVWDEDSEDGPCVCDFSCHSVLRSPVC
GSDGVTYGTECELKKARCLAQRELYVTAQGACRGPTLAPLPPAAPPHCTQTPYGCCQDNA
TAARGVGLAGCPSSCHCNPHGSYGGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGHALGPGGCESDSLAP
GTCAEMRCEFGASCVEEAGSARCVCPTSTCPEAGATKACGSDGVTYGDECQLRTIACRQG
VDISVQSLGPCPESVALGGRPTPAPVAVSGHNLSVALPFPPSAPPLAPTRTPHSQPTPQP
SPGPRTTASMPRTPTRPTVPPTAPTPAATLTTSAFGESGSADGSGDEGLSGDLEASGAGS
GGLEPPEGGSAVTPGPPMERASCYNAPLGCCSDGKTPSLDAEGSNCPATRAFQGVLELEG
VEGQELFYTPEMADPKSELFGETARSIESALDDLFRNSDVKKDFRSVRLRDLGPGSSVRA
VVDVHFDPATTFRASDVAQALLRQIQASRRRSLGVRRPLQEHMRFLDFDWFPAFFLGATT
GATVATATARATTMVPLPSAVTQRALSPSHTSQPADRTTALPTTRQPPTTAPRRVPGRRP
LPSGTQQPLKPCDSQPCLHGGTCQDQGPGGGFTCSCPVGRTGAVCEKAPHPSVPAFGGHS
FLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALTLLGGRVQLRFDTGSGPA
VLTSSVPVEPGRWHRLELSRHWRRGTLSVDGETPVVGHSPSGTDGLNLDTDLFVGGVPAD
QASVVLERTSIRVGLRGCIRLLDVNNQRLELSSWQGAVTRSAGVGACGDHPCLPNPCLGG
APCRALEAGMFHCLCPPGRFGPTCSADENPCDPNPCHGAAPCRVLPDGEAKCECPQGRGG
TTCQTVSERDYSQPFLADFNGFSYLELKGLHTFERDLGEKMALEVVFLARGPSGLLLYDG
QKTDGKGDFVSLALQDRFLEFRYDLGKGAAVIRSKEPVALDTWTRVSLERSGRKGAMRVS
DGPRVLGESPKSRKVPHTVLNLKEPLYIGGAPDFSKLARAAAVSSGFDGVIQLVSLKGHQ
LLNQEHVVRSVDVSSFAHHPCTQASGHPCLHGASCLPREASYECLCPGGFSGPHCEQGLT
EKSAGDVDALAFDGHTYVEYLSAVTESELTNEIPVPDAPDSGAPPSEKALQTSHFELSLR
TEATQGLVLWSGKATERADYIALAIVDGRLQLAYDLGSQPVVLSSTVPVNTNRWLRVRAH
REQREGSLQVGNEAPVTGSSPLGATQLDTDGTLWLGGLEKLPTGQALPKAYSTGFVGCLR
DVVVGRRPLQLLEDAVTKPGLQPCAAP
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctgtggccgtccggctgggccccgctgcagccgctcctgctgctcctggtg
gtggccgcgcgcgccctgcccagcgccgacgggacgtgcccggagcgcgcgctggagcgg
cgggaggaggaggcgaacgtggtgctcaccggcaccgtggaggagattctcaacgtggac
ccggtgcaacacacgtactcgagcaaggttcgagtctggcggtacttgaagggcaaagac
atggtgacccaagagagcctgcttgacggtggcagcaaggtggtgatcggtggctttggc
gaccccctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaac
cctgcacccccctacctgtggccagcccacaaaaatgagctgatgctcaactccagcctc
atgcgcatcacgctgcggaacctggaggacgtggagcactgtgtggaagacaaacctggg
acccacttcacaccagcatccccagtgcctctggatgcgtgccgaggaatgttgtgcggc
ttcggcgccgtgtgcgagcccagtgcagagggctcaggccgagcgtcctgcgtgtgcaag
aagagcgcctgtcccgccgtggtggcgcccgtgtgcggctctgacgcctccacctacagc
aacgagtgtgagctgcaccgggcccagtgcagtcagcagcgacgcatccgcctgctcagc
cgcgggccctgcgggtcccgggatccctgcgccaacgtgacctgcagcttcggcagcacc
tgtgtgcgctcagcagacgggcagacagcctcgtgcctgtgccccgccgcctgccagggg
ccccccgacggcccggtgtgcggcagcgacggtgccgactaccccagccagtgcggcctc
ctgcgccacgcgtgcgcccgccaggagaacatcttcaagaagttcgatggcccttgcgac
ccctgccagggcgcccgcagcgacccgagccgcgtctgccgcgtgaacccacgcacgcgg
cgcccggagatgctgctgcggccggagagctgccctgcccggcgagagcccgtgtgcggg
gatgacggcgtcacctacgacaacgagtgtgtcatgggccgcacgggagcggcccgtggt
ctcctcctccagaaagtgcgctctggccagtgccagcctcaagaccggtgcccagacgtg
tgcaggttcggtgccgtgtgcttgtcccgccggggccgcccccgctgctcctgcgaccgt
gtggtctgtgacggggcttacagacccgtgtgtgcgggcgacgggcacacgtatgacagc
gactgccagcgccggcaggctgagtgtcggcagcagcgcctcatcccggccaagcaccag
ggcccgtgcgatcaacccctgtccccgtgccttggggtgcactgcccatttggggcatca
tgtgctgtgaagaacggtgaagcggagtgtgtgtgccagcaggcgtgtccgggcatctac
gaccccatgtgtggcaccgacggggtcacgtatggcagcacgtgtgagctggaagccaca
gcctgcgccctgggacgggagatccgtgtggctcgccgaggaccctgtgaccgctgtggg
cagtgccgcttcggagctctgtgcgaggctgagactgggcgctgcgtgtgcccctccgag
tgcgtggccttggcgcagcccgtgtgcggttccgacgggcacacgtacgcgagcgagtgt
gagctgcacgtccacgcctgcacacaccagatcagcctgcacgtggtctcagcggggcac
tgccagacctgcggaggcgaggtgtgtgctttcggggcggtgtgcttggcggggcgatgt
gtgtgcccccggtgtgagcagcccccacccgggcccgtgtgcggcagcgatggtgtcacc
tacgacagtgcgtgtcatctccgagaggccgcctgtcagcagcagacccagatcgaggag
gcccgggcggggccctgtgagcaggcggagtgcggctctggaggctccggctctggggag
gacggtgagtgtgagcgggagctttgccggcagcgcggcggcgtctgggacgaggactcg
gaagacgggccctgcgtctgcgacttcagctgccacagcgtcctgaggagcccggtctgc
ggctcggacggggtcacttacggcaccgagtgcgagctgaagaaggccaggtgcttggcg
cagcgagaactgtatgtcacggctcagggcgcctgccgcggccccaccttggccccgctg
ccccccgcggcccccccacactgcacccagactccctacggctgctgccaggacaatgcc
acagcggcccggggtgtgggcctggctggctgccccagttcctgccactgcaacccacac
ggctcgtacggtggcacctgtgacccagccacgggtcagtgctcctgccgcccaggtgtt
gggggcctcaagtgtgaccgctgtgagcccggcttctggaacttccgtggcatcgtcact
gacggccggagcggctgcaccccctgcagctgtgacccccgaggagccgtgcgggacgac
tgtgagcagatgaccgggctgtgctcctgtaagcctggggtggccggacccaagtgcggg
cagtgtccagatggccacgccctgggccccggtggctgcgaatcagactccttggcaccc
ggcacgtgtgctgagatgcgctgtgagtttggggcgtcctgcgtggaggaagctggctcc
gcccgctgcgtgtgcccaacgtccacctgtccagaggccggtgctaccaaggcctgcggg
tcggacggagtgacctacggcgatgaatgccagctgaggaccattgcctgccgccagggc
gtggatatctccgtccagagcctcggcccgtgtccggagtctgtcgctctcggtggccgc
ccgacccctgcacccgtggctgtgtcagggcacaacctgagcgtggcactgcctttcccc
ccgagcgccccacccctggcgcccaccaggaccccccacagccagcccactcctcagccc
tcgccaggacctcggaccacggccagcatgcccaggactcccacgaggccgaccgtgccc
cccacagcccccactccagcagccacgctcaccacgtctgccttcggcgaatctggcagt
gctgacgggagcggcgacgaggggctgagtggggacctggaggccagtggggctggctca
gggggactcgagccccccgaaggtggcagcgctgtgacccctgggccacccatggagagg
gcttcttgctacaacgcccctttgggctgctgctcggatggcaagactccctcgctggac
gcagagggctccaactgtcccgccaccagggccttccagggtgtactggaactcgagggg
gtcgaggggcaggagctgttctacacaccggagatggctgaccccaagtcggaactcttc
ggggagaccgcgcggagcatcgagagcgcgctggacgacctcttccggaactccgacgtg
aagaaggacttccgaagcgtccgcctgcgggacctggggcccggcagctccgtccgagcc
gtggtggacgtgcactttgaccctgccacgacctttagggcatccgacgtggcccaggcc
ctgctccggcagatacaggcgtcccggcgccggtccctgggggtgaggcggccgctgcag
gagcacatgcgcttcctggacttcgactggtttcccgcattcttcctgggagccaccaca
ggagccacggtggccacagccacggccagagccaccaccatggtccccctgccttctgcc
gtgacccagcgggccctgtcccccagtcacaccagccagcctgctgacaggaccacagcc
ctgcccaccacacgccagccacccaccactgccccccgtcgcgtgcctggacgccggccc
ttgccctcaggcacccagcagccactgaagccctgtgactcccagccctgcctccacggg
ggaacctgccaggaccagggccctggcggcggcttcacctgcagctgcccggtgggcagg
acgggtgccgtctgtgagaaggcaccgcacccctctgtgccagccttcgggggccactcc
ttcctggccttccccaccctccgtgcctaccacacgctgcgcctggcgctggagttccgg
gcactggagccccagggtttgctgctgtacaacggcaatgcccggggcaaggacttcctg
gcgctgacgttgctggggggccgggtgcagctccggtttgacactggctcggggcccgcg
gtcctgaccagctcagtgcccgtggagcccggccgctggcaccgcttggagctgtctcgg
cactggcgccggggtacgctctccgtggatggggagacccctgttgtgggccatagcccc
agtggtactgatggcctcaacctggacacagacctctttgtgggcggcgtcccggcggac
caggcttccgtggtgctcgaaaggacctccatccgtgtcggcctcaggggctgcatccgc
ctcctggatgtgaacaaccagcggctggagctcagcagctggcagggggccgtgacccgg
agcgccggtgtgggcgcgtgtggggaccacccgtgcctgcccaacccctgcctcggtggg
gccccgtgccgagccctggaggctggcatgttccactgtctgtgcccccccggccgcttt
ggtcccacctgcagtgctgacgagaacccctgcgatccgaacccctgccacggggcagcc
ccctgccgcgtgctgcctgacggggaggccaagtgcgaatgcccccaggggcgagggggc
accacctgccagacagtttctgagcgggattattcccagcccttcctggctgacttcaac
ggcttctcctacctggagctgaagggcctgcataccttcgagcgggacctgggggagaag
atggctctggaagtggtgttcctggcacgcggccccagcggtttgctcctctacgacggg
cagaagacagacggcaagggggactttgtgtccctggcgttgcaggaccgcttcctggag
ttccgctatgacctgggcaagggggctgccgtcatcaggagcaaggagccagtggccctg
gacacctggaccagggtctcactggagcgcagtggccgcaagggggccatgcgcgtcagc
gatgggccccgcgtgctgggggagtccccgaaatcccgcaaggtaccgcacactgtcctc
aatctgaaggagccgctgtacattgggggggcccctgacttcagcaagctggcccgcgcg
gccgccgtgtcctccggcttcgacggcgtcatccagctggtttccttgaaaggccaccag
ctgctgaaccaggagcacgtggtgcggtccgtggacgtctcatcttttgcccaccaccct
tgcacccaggcctccggccacccgtgcctgcacggggcctcctgcctccctcgggaggcc
tcctatgagtgcctgtgccctgggggcttctcggggcctcactgcgagcaggggctgact
gagaagtcggcaggggacgtggacgcgctggccttcgacggacacacctacgtcgagtac
ctcagtgccgtgactgagagcgaactgaccaatgagatccccgttcctgatgctccggat
tccggggcccctcccagcgagaaggccttgcagaccagccacttcgagctgagcttgcgc
acggaggccacacaggggctggtgctgtggagcggcaaggccacagagcgggccgactac
atcgctctggccatcgtggacgggcgcctgcagctggcctacgacctgggctcccagccc
gtggtgctgagctctaccgtccccgtcaacaccaaccgctggttgcgggtcagggcgcac
agggagcagagggaaggttcccttcaggtgggcaacgaggcccccgtgactggctcttcc
ccgctgggtgccacgcagctagacacagatggaaccctgtggctgggtggcctggagaag
ctgcccacgggccaggccctgcccaaggcctacagcacaggctttgtgggctgcctccgg
gacgtggtggtgggtcggcgcccactgcagctgctggaagacgctgtcaccaagccgggg
ctccagccctgtgccgccccgtga
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