Neogale vison (American mink): 122900939
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Entry
122900939 CDS
T08764
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122900939 (LGI1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRRCT
DUF2695
LRR_14
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
122900939
NCBI-ProteinID:
XP_044096058
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All DBs
Position
2:207151006..207190377
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AA seq
641 aa
AA seq
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MQVGSLLQQLGPSHRTAPHRSLPRAVRCWSEEQLTNQLQVPVLKSRDTEAEETGGLLCDL
VSEQDNHQLNSRSPVHVWGYFFDCMESERSQRMGTACIPLKRIAYFLCLLSALLLTEGKK
PAKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLL
LFTSNSFDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPK
DIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLDHTNATVEDIYCEGPPEYKKRKINSLSP
KDFDCIITEFAKSQDLPYQSLSIDTFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYD
NITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIE
TFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIARTPQTLRT
PHLILSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSK
VMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQE
LNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcggctctctcctccagcagttgggtccctcccatcgcacagcacctcacagg
tctcttccccgagcagtgcgttgctggagcgaagagcagctcacgaatcagctgcaggtc
cccgttttgaaaagcagagatacagaggcagaggaaacgggtggactcctgtgtgacctg
gtctcagagcaagacaatcaccagctgaattccagaagccctgttcatgtttggggatat
tttttcgactgcatggaatcagagagaagccaaaggatgggaactgcctgcatccccctg
aaaagaattgcttatttcctatgtctcttatctgcgcttttgctgactgaggggaagaaa
ccagcgaagccaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgtgag
aatgccagatccattccacgcaccgttcctcctgatgttatctcattatcctttgtgaga
tctggttttactgaaatctcagaagggagttttttattcacaccatcgctgcagctctta
ttattcacatcgaactcctttgatgtgatcagtgatgatgcttttattggtcttccacat
ctagagtatttattcatagaaaacaacaacatcaagtccatatcaagacatactttccgg
ggactaaagtctttaattcacctgagcctcgcaaacaacaatctccagacactcccaaaa
gatattttcaaaggcctggattctttaacaaatgtggacctaagagggaattcatttaac
tgtgactgtaaactcaagtggctagtggaatggttggaccacaccaatgcaactgttgaa
gacatctactgtgaaggtcccccagaatacaagaagcgcaaaatcaatagtctctcgccc
aaggattttgattgcatcattacagaatttgcaaagtctcaagacctgccttatcaatca
ctgtccatagatactttttcttatatgaacgatgagtatgtagtcattgctcagcctttt
accggaaagtgcattttccttgaatgggaccatgtagaaaagaccttccgaaattatgac
aacattacaggcacatccactgtagtgtgcaagcctatagtcattgaaactcagctctat
gttattgtggcccagctgtttggcggctctcacatctataagcgagacagttttgcaaat
aaatttataaaaatccaggatattgaaattctcaaaatccgaaaacccaatgacattgaa
acattcaagattgaaaacaactggtactttgttgttgctgacagctcaaaagctggtttt
actaccatttataaatggaacggaaatggattctactcccatcaatctttacatgcgtgg
tacagggacaccgatgtggaatatctagaaatagccagaacacctcagacactcagaacg
cctcatttaatcctgtccagtagctcccagcgtcctgtaatctatcagtggaacaaagca
acacaattgttcactaaccaaacagatatccctaacatggaggacgtctatgccgtcaag
cacttctcggtgaaaggtgacgtgtacatttgcttgacaagattcattggcgattccaaa
gtaatgaaatggggaggttcctcctttcaggacattcagaggatgccatcacgaggatcc
atggtgttccagcctcttcagataaataactaccaatacgcaattcttggaagtgattat
tcctttacgcaagtgtataactgggatgcagagaaagccaaatttgtgaaatttcaggaa
ttaaatgttcaagcaccaagatcattcacgcatgtgtccattaataagcgtaattttctt
tttgcttccagttttaagggaaatacacagatttacaaacatgtcatagttgacttaagc
gcatga
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