Neogale vison (American mink): 122906653
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Entry
122906653 CDS
T08764
Symbol
NLRP1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122906653 (NLRP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122906653 (NLRP1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nvs04054
]
122906653 (NLRP1)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122906653 (NLRP1)
Pattern recognition receptors [BR:
nvs04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122906653 (NLRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
LRR_6
NOD2_WH
AAA_16
NPHP3_N
LRR_4
AAA_30
NB-ARC
nSTAND_NTPase4
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
122906653
NCBI-ProteinID:
XP_044104789
LinkDB
All DBs
Position
5:55421439..55463803
Genome browser
AA seq
1436 aa
AA seq
DB search
MASGVQWRLARYLDMLGKEELKEFQLQLPEKPLSGPQPHLTPACGRQPGGLEVASQLVAQ
HGEQQAWDLALHTWEQMGLSQLCAQARAEAALMSAEGSSLPCSPGAPSMQSPSGPTSTEV
LSFVQDPPTRSSRQPPDTSRYFLHNRYPFFFFKRDLPYSSNQKSLLQESPSAPTSTAVLE
DWVRPPQLSRKPRKQKAPRAEWLLVETSGEHSKAIRIRRQHQERKRPCPTKSRGNKGLHE
EFVELLLLHQPHHRCQESQSKGSCHHSRAEKQGWLIEVKDLFGPGLGAQEEGRAVVLHGV
AGVGKSVMARQVRRAWEEGRLYRDRFQRVFYFSCRQLAQSKTMSLKELITKDWTAPTAPS
EQILSQPGQLLLILDGLDELKWVFGKEESEVCPYWDQPQPVMTLLLGLLRKTILPGASLL
ITVRTTALQPFILSVEQPQWVKVLGFSESGRKEYFYKYFKSKNKANRAFHSVELNQPLLT
MCLVPLVSWLVCTCMKKQMERGESLGLPSQTATALCLHYLAQALPAQPLGTQLRGLCSLA
AKGIRQRETLLVWEDLRKHELEATVSALLEMGILRKHPSSPNYDFAHQYLQEFFAAVSCV
LGSEDKECHPPDSIRGLEDLLNVYGDLDPFEAPTTCFVLGLLSEPVQREMEAIFQGKVPV
ERKQKLLCWAEEEVRNQLPILQQSSLPMLHCLYEIQDKDFLTHAMAPFHGASVRVHTSLE
LLVFMFCIKFCTVKELRLKERGQHGHTGSPLHVALLRGFPVTDAWWEVLFFTLRTTGKLK
KLDLSGNCLSNTVVHSLCKALRFPSCCLETLRLAHCGLTAEGCIDLAWVLGTPKTLTNLE
LSFNPLLDLGVERLCNGLKQRGCRLQRLRLVGCSLTSSCCMALASALSASPRLTELDLQQ
NQLEDAGVRLLCEGLRRPTCQLRLLWLDQTRLSEEVTRMLRALEDKKPPLLIPSRWKPSE
TMPNEGPRETMPNEGPSDSMPNEGPHEGKMSGTSSLHQDRRESEGLSPPVAQEGLVGLPS
PAPPEDLQHMGPLGTEDDFWGPLGPVAIEVVDKDRSLHRVHLPMAGSYRWPSTGLRFVVR
EPATIDIEFCASDKFLHQMAWEQSWMVAGPLFDIKVKPGAVATVYLPHFVDLRGGCMDTS
LFQVAHFKEPGMLLEKPTRVELYHVVLEDPSFSPLGVFLRTIHTALRFLPITSMVLLYHH
ARPDETVFHLYLIPSDCCIRKAIDDEEKAFQFVQIRKPPPLASLYLGSRYTVSSSERLEA
IPKELELCYRSPGQPQLYSEFYVGDLGSGLRLQLKEGSGAVVWEALVKPGDLRLTSSLVP
PAPAASPAPPGAPASLHFLDRHREQLVARVTTVDPMLDKLLGQVLSEEQYEQVRAKATAA
NQMRELFRFSRSWDPACKDQVYQTLKETHPYLIMELWETWGGDRERGVSPPTQPLP
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagtccagtggcggctggcccggtacctggacatgttggggaaggaggag
ctgaaggagttccagcttcagctgcctgagaagcccctgagcgggccccagccccacctc
accccggcttgtgggcggcagcccgggggcctggaggtggcctcacagctggtggctcag
catggggagcagcaggcctgggacctggccctgcacacctgggagcagatgggcctgagc
cagctctgcgcccaggcccgggcagaggcggccttgatgtcagccgagggttcctcgttg
ccctgctccccgggcgcacccagcatgcagtcccccagcgggcccacctccaccgaggtg
ctgtcgttcgtccaggacccaccgaccaggagttcgagacagccgccggacacatccaga
tacttccttcacaatcgataccctttctttttctttaaacgagaccttccatattcctca
aaccaaaagtcactactccaggagtcacccagtgctcccacgtccaccgcagtcctggag
gactgggtgcgcccaccacagttgagccgcaagcccagaaagcagaaggctcccagagct
gagtggctcctggttgaaacgtctggagagcacagcaaagcaatcagaataagacgccag
caccaggagagaaagaggccctgccccacaaagtcacggggaaacaagggtttgcatgaa
gaatttgtagagctgctgcttctccatcaacctcaccacagatgccaggagtcccagagc
aaggggagctgtcatcacagcagggcggagaagcaaggttggttgattgaggtcaaagac
ttatttggcccaggtctgggtgctcaggaagaaggtcgagcagttgtactgcacggagtt
gctggagtcgggaagtcggtgatggccagacaagtgaggagggcctgggaggaaggccgg
ctctacagggaccgtttccaacgcgtcttctacttcagctgcagacagctggcccagtcc
aagacgatgagtctcaaggagctcatcacaaaggactggactgcccccacggctcccagc
gagcagatcctgtctcagcctggacagctgctgctcatccttgatggtttggatgagcta
aaatgggtctttgggaaggaggagtcggaggtatgtccatactgggaccagccgcagcca
gtgatgacgctgctgctcgggttgctgaggaaaaccatcctccccggggcatctctgctg
atcacagtgcggaccacggctctgcaaccgttcattctctctgttgagcagccacagtgg
gtgaaggtcctggggttctctgagtccggccggaaggaatatttctacaaatatttcaag
agtaaaaacaaagcaaacagagcctttcactcggttgagttaaaccaaccactgttgacg
atgtgtctcgtgcccttggtgtcctggctggtctgcacttgcatgaagaagcagatggag
cggggagagtcactcgggctgccctcccagactgccactgccctctgtctgcactacctt
gcccaggctctgccggcccagcctcttgggactcagctgaggggcctctgctctctggct
gccaagggcatcaggcagagagagaccttgcttgtttgggaagatctcaggaagcatgag
ctggaggccactgtctctgcactcttagagatgggcattcttcggaagcatccctcctcc
ccaaactacgactttgctcaccagtacctccaagagttctttgcagccgtatcctgcgtg
ctggggagtgaggacaaggagtgccatccccccgacagtatccgagggctggaagacctg
ctaaatgtgtatggggaccttgacccgtttgaggcaccaaccacatgtttcgtcctggga
cttctgagcgagccggtgcagcgggagatggaggccatcttccagggcaaggtgcctgtg
gagaggaaacagaaactgttgtgctgggccgaggaggaggtcaggaaccagctccccatt
ctgcagcagagctccctgccgatgctgcactgtttgtacgagattcaggacaaggacttc
ctgacacacgcgatggcccccttccacggggcgagcgtgcgcgtccacaccagcctggag
ctcctagtgttcatgttctgcattaaattctgcaccgtgaaggagcttcgactgaaagag
cgtggacagcatggacacacggggagccccctccatgtggctctgctcagagggttccca
gtcacagatgcctggtgggaggttctctttttcactctccggaccactggaaaactgaag
aagctggacctgagtggaaactgcctgagcaacaccgtggtacatagtctctgcaaggcc
ctgaggttcccaagctgctgtctggaaaccctgcggttggcccactgcggcctcacagct
gaaggctgcatagaccttgcctgggtgctgggcacccctaagaccctgaccaatctggag
ctgagcttcaacccgctcctggacctaggagtcgagcgcctctgcaatgggctgaaacag
cggggctgccggctacaaaggctgcgactggtcggctgcagcctcacatctagctgctgc
atggccctggcctctgcgctcagcgccagccccaggctgacggagctggacctgcagcag
aaccagctggaggacgccggcgtgcggctgctttgcgaaggcctcaggcgtccgacctgc
cagctcaggctcctgtggctggaccagacccggctgagtgaggaggtgacccggatgctc
cgagccctggaggacaagaaaccgccgctgctcatccccagcagatggaagccgagtgag
acgatgcctaatgagggcccacgcgagacgatgcctaatgagggcccaagcgactcgatg
cctaatgagggcccacacgaaggaaagatgagcggcacatcctcactccatcaggacaga
cgagagtcagagggactctcccctccagtcgcccaggagggactcgtcggtctgccttct
cctgcccctccagaggacctgcagcacatggggcctctggggactgaggatgatttctgg
ggtcccctgggacctgtggccatcgaggtggttgacaaagacagaagcctgcaccgagtt
cacttgcccatggctggctcctaccgctggcccagcacaggtctccgtttcgtggtgaga
gagcccgcgaccatcgacattgaattctgtgcctcagacaaattcctgcaccagatggcc
tgggaacagagctggatggtggccgggcctctgtttgacatcaaggtcaagccaggggcc
gtggcgactgtgtatctcccccacttcgtggacctccgagggggctgcatggacacctcc
ctgttccaggtggcccactttaaagagccagggatgctgctggagaagcccaccagggtg
gagctgtaccatgtggtcctggaggaccccagcttctcgcccctaggagtgttcctgcgg
accatccacactgccctgcgtttcctccccatcacctccatggtgctgctctaccaccac
gcgcgcccggatgagaccgtcttccacctctacctgatccccagcgactgctgtattcgg
aaggccatcgatgacgaagagaaggcgttccagttcgtgcagatccgcaagccaccccca
ctggcctccctctacctgggctcccgctacactgtgtccagctcggagaggctagaagca
atccccaaggagctggagctctgctaccgcagccccggacaaccccagctctactctgag
ttctacgttggagacttggggtcgggtctcaggctgcagctgaaagagggtagtggcgct
gtggtttgggaagccttggtgaaaccaggggacctccggctcacgtcttctctggtcccc
ccagcccccgcagcctcgcccgcaccccctggtgccccggcctcgctgcactttctggac
cggcatcgggagcagctggtggctcgagtgacaacggtggaccccatgcttgacaagctg
ctggggcaggtgctgagtgaggagcagtacgagcaggtgcgcgccaaggccacggccgcc
aaccagatgcgggagctgttcaggttcagcaggtcctgggacccggcctgcaaggatcaa
gtctaccaaactctgaaggagacccacccttacctcatcatggagctctgggagacgtgg
ggtggtgacagagagcggggcgtctccccaccgacccagcccctgccgtga
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integrated database retrieval system
