Neogale vison (American mink): 122907014
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Entry
122907014 CDS
T08764
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, A alpha chain
KO
K06751
MHC class I antigen
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04144
Endocytosis
nvs04145
Phagosome
nvs04218
Cellular senescence
nvs04514
Cell adhesion molecule (CAM) interaction
nvs04612
Antigen processing and presentation
nvs04940
Type I diabetes mellitus
nvs05163
Human cytomegalovirus infection
nvs05165
Human papillomavirus infection
nvs05166
Human T-cell leukemia virus 1 infection
nvs05167
Kaposi sarcoma-associated herpesvirus infection
nvs05168
Herpes simplex virus 1 infection
nvs05169
Epstein-Barr virus infection
nvs05170
Human immunodeficiency virus 1 infection
nvs05203
Viral carcinogenesis
nvs05320
Autoimmune thyroid disease
nvs05330
Allograft rejection
nvs05332
Graft-versus-host disease
nvs05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122907014
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122907014
04145 Phagosome
122907014
09143 Cell growth and death
04218 Cellular senescence
122907014
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
122907014
04612 Antigen processing and presentation
122907014
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122907014
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122907014
05170 Human immunodeficiency virus 1 infection
122907014
05168 Herpes simplex virus 1 infection
122907014
05163 Human cytomegalovirus infection
122907014
05167 Kaposi sarcoma-associated herpesvirus infection
122907014
05169 Epstein-Barr virus infection
122907014
05165 Human papillomavirus infection
122907014
09163 Immune disease
05320 Autoimmune thyroid disease
122907014
05330 Allograft rejection
122907014
05332 Graft-versus-host disease
122907014
09166 Cardiovascular disease
05416 Viral myocarditis
122907014
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
122907014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122907014
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nvs00537
]
122907014
Exosome [BR:
nvs04147
]
Exosomal proteins
Proteins found in most exosomes
122907014
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nvs00537
]
Antigens
122907014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
MATalpha_HMGbox
FrpC
Motif
Other DBs
NCBI-GeneID:
122907014
NCBI-ProteinID:
XP_044105552
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All DBs
Position
1:complement(123037243..123039938)
Genome browser
AA seq
342 aa
AA seq
DB search
MRPLALLLLLLSGALALTETRTGSHSLRYLFTVVSQPGRREPRYLERSYVDDTQFPLFDS
DSASLRMEPRAPWVEQEGLEYWAQQTRDSRTCIQTLXGRLQEVGSYCNPSEAGFHTFQRV
IGCHVGPDGRFLHGYLRDAYDGVDHIALNKDLCSWTKADSTAQITGQKWEATGVAEQYRN
YMERRCMEWLHRHMEKGXEMLLRTEPPNTHVTRHPISDHDVALKCWALGFYPVEITLTXQ
HDEEDLTQDTELVETRPAGDGTFQKRAAVVVPSGEEQRYMCHVQHKGLPQPITLRWELPP
EPTIPIMGTIVALVLVVTGAVVVGTVMWRKKHSRREGSGRGI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccctagccctcctcctgctgctgctgtcgggggccctggccctgaccgagacc
aggacgggctcccactccctgaggtatttgttcactgtggtgtcccagcctggccgcagg
gagccccggtatttggaacgcagctatgtggacgacacgcagttcccgctgtttgacagc
gactctgccagtctgaggatggagccacgggcgccctgggtggagcaggaggggctggag
tattgggcccagcagacccgggactctaggacatgcatacagacactctgagggaggctg
caagaagtgggcagctactgcaacccaagcgaggccgggtttcacaccttccagagagtg
ataggctgccacgtggggcctgatgggcgctttctgcacgggtaccttcgtgatgcctat
gatggcgtggatcacatcgccctgaataaggacctgtgctcctggaccaaggcagactcc
accgcgcagatcactggtcagaagtgggaggcaactggtgtggcagagcagtacaggaac
tatatggagcgcagatgcatggagtggctccacaggcacatggagaaggggtaggagatg
ctgctgcgcacagaaccccccaacacacatgtgacccgccaccccatctctgaccatgat
gtcgccctgaagtgctgggccctgggcttctaccctgtggagatcactctgacctagcag
catgatgaggaggatctgacccaggacacagagcttgtggagaccaggcccgcaggggat
ggaaccttccagaagcgggcggctgtagtggtgccttctggagaggagcagagatacatg
tgccatgtgcagcacaaggggctgccccagcccatcaccttgagatgggagctgccacct
gagcctaccatccccatcatgggcaccattgttgccctggttcttgtggtcactggagct
gtggtggtgggaactgtgatgtggaggaagaagcactcaagaagggaagggagtgggagg
ggaatttga
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