KEGG   Neogale vison (American mink): 122911212
Entry
122911212         CDS       T08764                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain isoform X1
  KO
K06752  MHC class II antigen
Organism
nvs  Neogale vison (American mink)
Pathway
nvs04145  Phagosome
nvs04514  Cell adhesion molecules
nvs04612  Antigen processing and presentation
nvs04640  Hematopoietic cell lineage
nvs04658  Th1 and Th2 cell differentiation
nvs04659  Th17 cell differentiation
nvs04672  Intestinal immune network for IgA production
nvs04940  Type I diabetes mellitus
nvs05140  Leishmaniasis
nvs05145  Toxoplasmosis
nvs05150  Staphylococcus aureus infection
nvs05152  Tuberculosis
nvs05164  Influenza A
nvs05166  Human T-cell leukemia virus 1 infection
nvs05168  Herpes simplex virus 1 infection
nvs05169  Epstein-Barr virus infection
nvs05310  Asthma
nvs05320  Autoimmune thyroid disease
nvs05321  Inflammatory bowel disease
nvs05322  Systemic lupus erythematosus
nvs05323  Rheumatoid arthritis
nvs05330  Allograft rejection
nvs05332  Graft-versus-host disease
nvs05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    122911212
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122911212
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    122911212
   04612 Antigen processing and presentation
    122911212
   04658 Th1 and Th2 cell differentiation
    122911212
   04659 Th17 cell differentiation
    122911212
   04672 Intestinal immune network for IgA production
    122911212
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    122911212
   05164 Influenza A
    122911212
   05168 Herpes simplex virus 1 infection
    122911212
   05169 Epstein-Barr virus infection
    122911212
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    122911212
   05152 Tuberculosis
    122911212
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    122911212
   05140 Leishmaniasis
    122911212
  09163 Immune disease
   05310 Asthma
    122911212
   05322 Systemic lupus erythematosus
    122911212
   05323 Rheumatoid arthritis
    122911212
   05320 Autoimmune thyroid disease
    122911212
   05321 Inflammatory bowel disease
    122911212
   05330 Allograft rejection
    122911212
   05332 Graft-versus-host disease
    122911212
  09166 Cardiovascular disease
   05416 Viral myocarditis
    122911212
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    122911212
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nvs04147]
    122911212
Exosome [BR:nvs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122911212
  Exosomal proteins of epithelial cells
   122911212
  Exosomal proteins of breast milk
   122911212
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_2 ig C2-set_3 MHC_I RAG1
Other DBs
NCBI-GeneID: 122911212
NCBI-ProteinID: XP_044111617
LinkDB
Position
1:119684254..119807058
AA seq 279 aa
MPGKMALWIPRGLWTAAVMMILVVLSIPVAEGRDSPQDFVYQFKGECYFTNGTERVRHVT
RHIYNREEFARFDSDVGEYLAVTELGRPDAQYWNSQKDIVERTRAEVDTVCRHNYEIDER
IILQQRVEPTVTISPSRTEVLNHHNMLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLI
RNGDWTFQILVMLEMTPQRRDVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGIGGFVL
GLIFLGLGLIIRHRSQKGPLGSPPTGTSSALIRWWCGHR
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcctggaaagatggctctgtggatccccagaggcctctggacagcagctgtgatgatg
atcttggtggtgctgagcatccctgtggctgagggcagagactctccacaggatttcgtg
taccagtttaagggcgagtgctacttcaccaacgggacggagcgggtgcggcacgtgacc
agacacatctataaccgggaggagttcgcgcgcttcgacagcgacgtgggggagtacctg
gcggtgaccgagctggggcggccggacgctcagtactggaacagccagaaggacattgtg
gagcggacgcgggccgaggtggacaccgtgtgcagacacaactacgagattgacgagaga
attatcctgcaacagcgagtggaacctacagtgaccatctccccatccaggacggaggtt
ctgaaccaccacaacatgctggtctgctcggtgacagatttctacccaggccagatcaaa
gttcggtggtttcggaatgaccaggaggagacagctggtgtggtgtccactccacttatt
aggaatggggactggaccttccagatccttgtcatgctggaaatgactccccagcgaaga
gatgtctacacctgccatgtggaacaccccagcctccagagccccatcacagtggaatgg
cgagcacagtcggaatctgcccagagcaagatgctgagtggcatcggaggctttgtgctg
gggctgatcttcctcggtctgggccttatcatccgtcacaggagccagaaaggacctctt
gggtctccgccaacaggtactagttctgctctgattcggtggtggtgtgggcaccggtga

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