Neogale vison (American mink): 122913174
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Entry
122913174 CDS
T08764
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122913174 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122913174 (KDM2A)
04121 Ubiquitin system [BR:
nvs04121
]
122913174 (KDM2A)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122913174 (KDM2A)
Enzymes [BR:
nvs01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
122913174 (KDM2A)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122913174 (KDM2A)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122913174 (KDM2A)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122913174 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122913174 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
122913174
NCBI-ProteinID:
XP_044115739
UniProt:
A0A8C7B9C0
LinkDB
All DBs
Position
7:201800808..201918990
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSNRRSVLTSPVANGVNLDYDGLGKSCRSLPSLKKT
LSGDSSSDSSRASHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPARPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDDEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagactgcgtggtaccatgcgacga
cgctatgaagatgatggcatctcagatgacgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaataaatataatgcaaattttgttacttttatggagggaaaa
gattttaatgtagagtatatccagcggggtggcttaagagaccctctgattttcaagaat
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagactccagaggaggagcgagaaaaactc
tataatgtcatcagtctagagttcagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtagacaacatgtggccaaggcatctgaaggagagt
cagactgaatcaacaaatgccatcttggagatgcagtaccccaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtctttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgttatccattctactacgagatgtgttggtacgtgttggagcgctac
gtgtactgcataacaaaccgctcccacctaactaaggaatttcaaaaagagtccctcagt
atggatttggagttaaatgggttggaatctggaaatggggatgaagaagcagtggatcga
gaaccaaggcgcctgagcaataggcgttctgtcctcacgagccctgtagccaatggggtc
aacctggattatgacggactgggcaaaagctgccggagtcttccaagtctgaagaaaacc
ttgtcaggggactcctcctctgactctagccgggcctcccataacggccaagtgtgggat
ccccagtgtagtcctcgaaaggacaggcaggtgcatctgacccattttgagcttgaaggc
ctccgctgtcttgtagataagttggagtctctgccactgcacaagaagtgtgtccccaca
gggatagaagatgaagatgctcttattgccgacgtgaagattttgctggaggagcttgcc
aacagcgatcccaagttagccctcactggagtccccatagtgcagtggccaaaaagggat
aagcttaaattccccgcccggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacaccatgaaaccggctcctcggttaacacccgtgaggcctgctgccgcctcccccata
gtgtcaggagcccggcggagacgggtgcgctgccggaagtgcaaagcgtgtgtgcaagga
gagtgtggtgtttgccactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgttcttcggcagtgcttagcacccagactgcctcactctgtcacgtgt
tccctctgtggagaggtggatcaaaatgaggagacacaggacttcgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagaaggg
ctgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacagc
tcggagaaagcccagaagcggaaaatggaagagagtgacgacgaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcacccacc
tccatgctgcagctcatccatgacccggtctccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctacaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagccttgacctcagt
tggaccaacatctccaagaaacagctgacatggcttgtcaacaggctgccgggactgaag
gacctcctcctagcaggctgctcctggtctgcagtatctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataaaccaggtcaggacaatcgcagtaagctccggaac
atgactgacttccggctggcaggccttgacatcacggatgccacgcttcgcctcatcatt
cgccacatgcccctcctctctcgactagacctcagtcactgcagccacctgacagaccag
tcctccaacctgctcaccgctgtcggctcttccactcgctactccctcacggagctcaac
atggcaggttgcaataaattgacagaccagaccctgatctacctacggcgaattgccaac
gtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
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