Neogale vison (American mink): 122913957
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Entry
122913957 CDS
T08764
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04657
IL-17 signaling pathway
nvs04926
Relaxin signaling pathway
nvs04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
122913957 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
122913957 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
122913957 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvs01002
]
122913957 (MMP13)
Peptidases and inhibitors [BR:
nvs01002
]
Metallo peptidases
Family M10
122913957 (MMP13)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
122913957
NCBI-ProteinID:
XP_044116538
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All DBs
Position
7:100583548..100594338
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AA seq
474 aa
AA seq
DB search
MSITMLPGVLAAVLFLSWTQCWSLPLPSDGEDDLSEEDFQLAEHYLKSYYYPLNPAGILK
KSGAGSVVDRLREMQSFFGLEVTGKLDDNTLDIMKKPRCGVPDVGEYNVFPRALKWPKTN
LTYRIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRLHNGTADIMISFGTKEHGDFYP
FDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPG
ALMFPIYTYTGKNHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPEKCDPALTLDAITSLR
GEMMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSRDLIFIFRGRKFWAL
NGYDILEGYPQKISELGFPKEVKKISAAVHFEDTGKTLFFSGNQVWSYDDTNQVMDRDYP
RLIEDDFPGIGDKVDAVYEKNGYIYFFSGPVQFEYSTWSKRVVRVMPANSLLWC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcacgatgctcccgggcgtcctggctgccgtgctcttcttgagctggactcaa
tgttggtccctgccccttcccagcgatggcgaggacgatctgtccgaggaagacttccag
cttgccgagcactacctgaaatcctactactaccccctgaatcccgctggaatcctgaag
aagtcgggcgcaggctccgtggttgacaggctccgagaaatgcagtccttcttcggctta
gaggtcactggcaaacttgatgataacaccctggacatcatgaagaaaccaagatgtggg
gtccccgatgtgggcgagtacaatgttttcccccgagctctcaagtggcccaagacgaat
ctgacctacaggattgtgaattatacccctgatctgactcattctgaggttgaaaaggca
ttcagaaaagccttcaaagtttggtcagatgtgacccctctgaatttcaccagacttcac
aatggcactgctgatatcatgatctcttttggaactaaagaacatggcgatttctaccca
tttgatggaccttccggcctgctggctcatgcttttcctcctgggccaaactatggaggg
gatgcccattttgatgatgatgaaacttggacaagtagttccaaaggctacaacttgttc
cttgttgctgcccacgagtttggccactccttgggcctcgaccactccaaggacccgggg
gcactcatgtttcccatctacacctacacgggcaagaaccactttatgcttcctgatgac
gatgtacaaggcatccagtctctctacggcccaggagacgaagaccccaacccgaaacat
cccaagacaccagaaaaatgtgaccccgccttgaccctggatgccatcaccagcctccga
ggagaaatgatgatctttaaagacagattcttctggcgcctgcaccctcagcaggtggac
gccgagctgttcttgacgaaatccttctggccggaacttcccaaccgaatcgacgccgcc
tacgaacacccctcccgggacctcatcttcatcttccgaggcagaaaattttgggctctt
aatggttatgacattctggaaggttatccccaaaaaatatccgaactgggatttccaaaa
gaggttaagaagatcagcgcagccgtccactttgaagacacagggaagacgctcttcttc
tcgggaaaccaggtctggagctatgatgacaccaaccaggtcatggatagagactacccc
aggctgatagaagacgacttcccaggcattggtgataaagtggatgccgtctacgagaaa
aacggttatatctatttcttcagcgggcccgtgcagtttgagtacagcacctggagcaag
cgtgttgtgcgtgtcatgccagcgaattccctgttgtggtgttaa
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