Neogale vison (American mink): 122917766
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Entry
122917766 CDS
T08764
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122917766 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nvs01007
]
122917766 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvs03016
]
122917766 (IARS1)
Enzymes [BR:
nvs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122917766 (IARS1)
Amino acid related enzymes [BR:
nvs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122917766 (IARS1)
Transfer RNA biogenesis [BR:
nvs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122917766 (IARS1)
Prokaryotic type
Other AARSs
122917766 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122917766
NCBI-ProteinID:
XP_044121961
LinkDB
All DBs
Position
9:complement(97380004..97449092)
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPAEEEKILQFWSEFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQNGFHVERRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIVEYNNQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDENVSLVAWTTTPWTLPSNLALCVNP
DMQYVKIKDVVRGKLLILMEARLSALYKLESDYEILERFPGTCLKGKKYRPLFDYFVQCK
ESGAFTVLADNYVREEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSPPVCPVDASGCFTA
EVTDFTGQYVKDADKNIIRTLKEKGRLLVSSTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDQLLRNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGAKISDLHRESIDHLTIPSRCGKGVLRRISEVFDCWFESGSMPYAQVHY
PFENKREFDDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFRNVIVNGLVLASDGQK
MSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVLRLQKEEETEFLYNENTVKESANITDRWVLSFMQSLVGFFETEMAAYRLYTVV
PRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVTALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPVSVQDKDTHSIHYLMLPHVREELIDKNTERAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALREIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFRAVMASIKQLSSEELERFQASGTIVVEGHELHEEDIRLMYTFDQTTGGTMQ
YEAHSDAQVLVLLDVTPDQAMVDEGVAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGK
YLNNVIESHTEFIFATIKAPLKPYPVPTSDKVLIQEEIQLKGSDLEITITRGSSLPGPAC
AYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKNVITSIFGVKDTDLAVLRGAAEIRN
QTDLLSLSGKTLRVAAGSAPAVVDGPGTALCRYINLQLLNAGPQECVKGTVGTLLLENPP
GQNGLTHQGLLYETAKVFGLRSRKLKLFLNEAQTHEITEEIPMKTLNMKTVYVSVLPMTA
EF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagttccagaaaacatcaattttcctgctgaagaagagaaaatcttacag
ttctggtctgaatttaactgttttcaggaatgcttaaagcaatcaaaacataagccgaaa
tttacgttctatgatgggcctccttttgcaactggactacctcactatggacatatactt
gcagggacaattaaagatatagttaccagatatgctcaccagaatgggtttcatgttgag
agaagatttggatgggattgtcatggcttacctgtggaatatgaaattgataagacactg
ggaatcagaggaccagaggatgtagccaaaatggggattgtagaatataacaatcagtgc
cgagcaattgtgatgagatattctactgagtggaagtccactgttaccagacttggccga
tggattgactttgacaatgactacaaaactctgtatccacaattcatggaatctgtctgg
tgggtcttcaagcagctctatgataaaggccttgtgtatagaggtgtgaaagtcatgccc
ttctccaccgcatgcaacactccactgtccaacttcgaatctcaccagaactacaaggat
gttcaagacccttcagtgtttgtaactttccctttggaggaagatgaaaatgtgtctttg
gtggcttggacgaccactccctggactctacctagtaaccttgccttgtgtgttaatcca
gacatgcagtacgtgaagattaaagatgttgtcagaggaaaattactcattttaatggaa
gccagattatcagccctctataagttggagagtgactatgagatccttgaaagatttcct
ggtacctgtctcaaaggcaagaagtataggcccctgtttgactattttgtgcagtgcaag
gagagcggtgctttcacggtacttgctgacaactacgtgcgggaggaggagggcacagga
gtggtgcaccaggctccttacttcggtgctgacgactatcgggtctgtatggacttcaac
atcattcagaaagactctcctcccgtttgccctgtggatgcttcaggctgtttcacggca
gaagtgacagatttcacgggacagtacgtgaaggatgctgacaaaaacatcatcaggact
ctgaaggagaaaggccgacttcttgtttccagcaccttcactcacagttaccccttctgc
tggaggtcagacactcccctgatttacaaagccgtgcccagctggttcgtgcgggtggag
cacatggtggaccagctcctgcggaacaacgacctgtgttactgggtcccagagtttgtg
cgagaaaagcgatttggaaattggctgaaagatgcacgtgactgggcaatttccagaaac
agatactggggtacgcccatccccctgtgggtcagcgatgactttgaggaggtagtatgc
attggatcgatggcagaacttgaagagctgtcgggggcaaagatctctgatcttcacaga
gagagcattgatcatctgaccatcccttcccgctgtgggaagggagtgttgcgtcgcatc
tctgaagtgtttgactgttggttcgagagcggcagcatgccctacgctcaagttcattat
ccgtttgaaaacaagagggagtttgatgatgcatttcctgcagacttcattgctgaaggc
attgaccagaccagaggatggttttacaccctgctggtgctggccactgctctttttgga
cagccgcctttcaggaacgtgattgtgaacgggctcgtcctggcaagtgatggtcaaaaa
atgagcaaacgaaaaaagaattatccggatccactttcaatcatccataaatatggtgcc
gacgccctcagactgtatctgatcaactcccctgtggtgagagcagaaaaccttcgattt
aaggaggagggtgtgcgtgatgtcttgaaggatgtgctgctcccttggtacaacgcctac
cgcttcttcatccagaacgtcctgaggctacagaaggaggaagaaacggaattcctctac
aacgagaacacagttaaagaaagtgccaacatcacagaccggtgggtcctgtccttcatg
cagtcgctggttgggttcttcgagactgaaatggcagcttacaggctctacacggtggtg
cctcgcctggtcaagtttgtggatgtcctaaccaactggtacgtcaggatgaaccgcaga
aggctgaagggtgaaaacggggtggaggactgtgttacggccctggagaccttgttcagc
gtcctgctgtccctgtgcagactgatggccccctatacgccttttctcaccgaattgatg
taccagaatctaaagctgctgatcgaccctgtttctgtccaggacaaggatacacacagc
atccactacctcatgctgccccatgttcgggaggagctgattgacaagaacacggagaga
gccgtttctcggatgcagtctgtgattgaactcgggcgagtgattcgagaccgcaaaacc
attccgataaagtatcctttgaaagaaattgtggttatccatcaggatccagaagctctt
cgtgagatcaagtctttggagaagtatatcattgaggaattgaacgtccgaaaggtcacg
ctgtctacagataaaaacaagtatggcattcgcctaagggcagagcctgatcacatggtc
ctggggaagcgtctgaagggagccttccgggcagtgatggcgtccatcaagcagctgagc
agtgaggagctggagcgcttccaggcgagcgggaccattgtcgtagaaggccatgagcta
catgaagaggacatccgcctcatgtacacatttgatcagacaacaggagggacaatgcag
tatgaagcacactcagatgcccaggttttggttctcttagatgtcactcccgaccaggca
atggtggatgaaggagtggctcgggaggtcatcaatcgcatccagaaacttcgcaaaaag
tgcaatctggtcccaactgatgaaataacagtttattataaagcaaagtctgaagggaag
tatctgaataatgttatcgaaagccacacagagttcatatttgccaccataaaggctccc
ttgaaaccgtatccagttccaacatcagataaagtccttattcaagaagaaatacagtta
aagggttctgacctggaaattacaatcaccagaggatcatccctgcctggtcctgcttgt
gcatatgtcaatcttaacatttgtacaaatggcagcgagcaaggtggagtattacttctg
gaaaatccaaaaggcgataacaggttggaccttttaaagctgaagaatgttattactagt
atttttggtgtgaaagataccgacctggctgtcctccgtggtgccgcagaaatacgaaac
cagactgacttactaagtctcagtgggaaaacccttcgcgtggcagcggggtctgccccc
gctgtggtggacggccccggcactgcactctgccgctacatcaacctgcagctcctgaac
gcaggcccacaagagtgtgtaaagggaacagtgggcacactccttctggaaaaccccccc
gggcagaacggactcacccaccagggccttctgtatgagacagccaaggtgtttggtctt
cgcagcaggaagctcaagctgtttctgaacgaggctcagacacacgaaattacagaagaa
atccccatgaagactttgaacatgaagactgtgtatgtttctgtattacccatgacagcg
gaattctaa
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integrated database retrieval system
