Neisseria wadsworthii: H3L96_05905
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Entry
H3L96_05905 CDS
T07067
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nwd
Neisseria wadsworthii
Pathway
nwd03030
DNA replication
nwd03410
Base excision repair
nwd03420
Nucleotide excision repair
nwd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L96_05905 (ligA)
03410 Base excision repair
H3L96_05905 (ligA)
03420 Nucleotide excision repair
H3L96_05905 (ligA)
03430 Mismatch repair
H3L96_05905 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwd03032
]
H3L96_05905 (ligA)
03400 DNA repair and recombination proteins [BR:
nwd03400
]
H3L96_05905 (ligA)
Enzymes [BR:
nwd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H3L96_05905 (ligA)
DNA replication proteins [BR:
nwd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3L96_05905 (ligA)
DNA repair and recombination proteins [BR:
nwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H3L96_05905 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L96_05905 (ligA)
MMR (mismatch excision repair)
DNA ligase
H3L96_05905 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H3L96_05905 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
5_3_exonuc
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QMT34634
LinkDB
All DBs
Position
1259949..1262369
Genome browser
AA seq
806 aa
AA seq
DB search
MNELSHRIRTLTDQLNRYAHEYYTLDAPTVPDAEYDRLFRELEALEAAHPELRLPESPTQ
RVGGGLLAGFESVRHEVPMLSLSNAFSPQDDSGVFDHAEMLAFDERVRSGLGGGKPEYVI
EPKFDGLAVSLLYRDGVLVRGATRGDGETGEDITQNVKTIGNVPLRLYGDDVPELIEVRG
EVLMLKADFEALNRRQAEAGQKTFANPRNAAAGSLRQLDSRITAQRKLHFFAYGIARQQG
GKVLKAHIQELAYLGELGFSLPHGHFGFFGNIADVLRFYEDMRQKRPELPYEIDGMVVKV
NSLAQQRELGFISRAPRWAVAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGV
TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVVADRRPMRAANVSDRHLQETV
QSDLFAPTVESGGAEPVYPPYRLPEHCPICGSDIEREAGEAVARCSGGMLCQAQRAQGLI
HFASRKAMDIEGLGQRQIEALVEQDLVRHFADLYHLDIAALQRMKENAAEDVAEEGKNKK
QSPTKWAQNILDGIAASRQPELSRFLFALGIRHVGERTAKVLAQAFGTLENVRRAPEPLL
ACLPDIGAVVARSIAHFFAQSEQQVMIDELLAAGVMPEAQPVSLPPAQYAQPQKWLARLP
GIRLTENKAQALWDLAGQDIDALLNDKALPAEWQAWRVDEQNRKLLQAVQQFLSENMAGQ
PAEVSDRHHAAAGKTFVLTGTLPTLKRDEAQALIEAAGGKVSGSVSKKTDYVVAGEAAGS
KLEKAKALGVAVLDEAALLAFLHETE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattatcacaccgcatccgaacgcttaccgaccaactcaaccgctacgcccac
gaatattacacgctcgacgcgcctaccgtgcccgatgcggaatacgaccgactgttccgc
gaactggaagcgctggaagcggcgcatcccgaactacgcctgcctgaaagcccgacgcag
cgggtgggcggcggcctgttggcaggcttcgagagcgtgcggcacgaagtgcccatgttg
tcgctttccaatgcgttctcgccgcaggatgacagcggtgtattcgaccatgccgaaatg
ctggcgttcgacgagcgggtgcgcagcggtttgggaggcggcaagcccgagtatgtgatt
gaaccgaagttcgacggcttggccgtgagcttgctgtatcgcgacggtgtgttggtgcgc
ggtgcaacccggggcgacggcgaaacaggcgaagacatcacgcaaaacgtaaaaaccatc
ggtaatgtgccgttgcgcctgtatggcgatgatgtgcccgaattgattgaagtgcgcggc
gaagtgctgatgctgaaggccgactttgaagcattaaaccgtcggcaggccgaggcgggg
cagaaaacctttgccaatccgcgcaatgccgcggccggcagcctgcgccaattggattcg
cgcatcacggcgcaacgcaagttgcatttttttgcttacggcattgctcgccagcagggc
ggtaaagtgctcaaagcgcatattcaggagttggcctatttgggcgaactcggattcagc
ctgccgcacgggcatttcggcttcttcggcaatatcgcggatgtgttgcgtttttatgaa
gatatgcgccaaaaacgccccgagttgccatatgaaatcgacggcatggtggtgaaggtg
aacagcttggcgcagcagcgcgagttgggttttatttcccgcgcgccgcgctgggcggtt
gcccacaagtttcctgcagaagaggcgttaaccgtggtggaggcgattgacgtgcagata
ggccgtacgggcgcggtaacgccggttgcccgtttgcagccggtatttgtgggcggagta
accgtaaccaacgccactttgcataatcaggacgaagtgagccgcaaagatgtgcgtgtg
ggtgataccgtggtggtgcgccgcgccggcgatgtgattcccgaagtggtaagggttgta
gcggataggcggccgatgcgcgctgcaaacgtttcagacaggcatttgcaagaaaccgtg
cagagcgatttgtttgcacccactgtggaaagtggaggcgcagaaccggtttacccgcct
taccgtttgcctgagcattgcccgatttgcggcagcgatattgaacgtgaggcgggcgag
gcggtggcacgttgcagcggcgggatgctttgccaagcccagcgtgcgcagggtttgatt
cattttgcttcgcgcaaagcgatggacatcgagggcctggggcagaggcagattgaggct
ttggtggagcaggatttggtacgccattttgccgatttatatcatttggatattgctgct
ttgcagcgtatgaaagaaaacgccgccgaagatgtggcggaagagggcaaaaataaaaag
cagtcgcccaccaaatgggcgcagaatattctcgacggcattgccgccagccggcagccg
gaattgtcgcgttttctgtttgcgctcggcatccggcatgtgggcgaacgcacggccaaa
gtgttggcgcaggcgttcggtacgcttgaaaacgtgcggcgggcgccggaaccgctgttg
gcctgtttgcccgacatcggtgccgtggtggcccgttcaatcgcccattttttcgcgcaa
agtgagcaacaggtgatgatagatgagctgttggcggcgggtgtgatgccggaagcgcag
ccggtgagcctgccgccggcgcaatatgcgcagccgcaaaaatggttggcccgcctgccc
ggtatccggcttaccgaaaataaagcgcaggctctgtgggatttggccggacaggatata
gatgcgttgctgaacgataaagctttgccggccgagtggcaggcatggcgggtagatgag
caaaaccgcaaactgctgcaagcagtgcagcaatttctgtcggaaaatatggccgggcag
ccggcggaagtttcagacaggcatcatgcagcagcaggcaaaaccttcgttttgaccggt
acgctgcccaccttaaagcgtgatgaagcgcaagctttgattgaagcggcaggcggcaag
gtatcgggcagcgtgtcgaaaaaaaccgattatgtggtggcaggcgaggcggcgggcagc
aagctggagaaagccaaggctttgggtgtggcagtgctggatgaagccgcattgctcgcg
tttttacacgaaacagaatga
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