KEGG   Nematolebias whitei (Rio pearlfish): 119408700
Entry
119408700         CDS       T08042                                 
Name
(RefSeq) protocadherin gamma-C5
  KO
K16497  protocadherin gamma subfamily C
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:nwh04515]
    119408700
Cell adhesion molecules [BR:nwh04515]
 Cadherins
  Protocadherins
   119408700
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_tail Cadherin_C_2 RET_CLD1
Other DBs
NCBI-GeneID: 119408700
NCBI-ProteinID: XP_037531468
LinkDB
Position
4:complement(20324553..20340468)
AA seq 996 aa
MDSGWRKRSRGGGGGGGGRLWRLYFCLACVSSASAQLSYSVPEELSPGSVVGNVAKDLGL
TAQQIVQRKLRVQSESGVEYFELKEVTGDLVIKQKIDREQLCELRSSCSLHLQLLVENPL
QIHRAVVDVLDVNDNAPRFSTSTISLEVSEAASPGTRFRLESAHDPDVGANSLRTYQLAA
NDFFILKVETKSDGSKFPELVVDKALDREARASFRLMLTAVDGGQPEKSGSTLLLIKILD
VNDNAPVFEEPVKKVTLLETVALGTLVTKLNATDADAGSNGDISFLFGKYTSERVLQLFS
VDSKSGEIRVKGSVDYEKGASYHITVQARDGGSPAMEGSCNVIVDVTDENDNAPEVTLTS
LTSPIKEDSDPGTVIALISARDLDSGVNGQVTLTIPPGLPFKLNSAFGMHYNLITASRLD
RETVPEYTVVIKATDAGSPPLSSQISFVVKLSDVNDNPPIFSQPSYSVDIPENNAPSSPI
TAVSATDPDLGENAHVSFSILPSMVQGSPISSYVYINPETGHIYSMRSLDHEQLKNFRIE
VQAQDAGVPPRTTNVTVHVFVVDVNDNAPVMVHPSHPKDKRLQLAVPPSAGPGHLINKLV
AVDADSGHNAWLFYSIAPGPNVGMFRIGAHTGELRTARKLAEEEGGSAYDITVVIQDNGD
PPKSSSVNITVTVDEKAAANEAPVIPHHNQFYHRTGMPDITLYLIISLACVSGVAFITFV
VFMVRCLRHRDPMLGDSECCFCCYDRHRPSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQ
DPHMRTYRPCYSTISSRSDFVFMKTPMLSHNNTLNTTLSRKQLMNSVSEFREFPFAHVCV
QKDCVKQEFSKNPHMPYGTQIRWTTKNGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAA
ANEVSEATATLGPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQALAQQ
ATQQALPPPQSSGQAEPPKAAQTPASKKKSTKKEKK
NT seq 2991 nt   +upstreamnt  +downstreamnt
atggactccgggtggaggaagcgctccagaggaggaggaggaggtggaggagggaggctg
tggaggctttacttctgtctggcctgcgtgtcctctgcctcggctcagctcagctattcc
gtcccggaggagctcagtccgggctcggtcgtggggaacgtggctaaggatctgggtctt
acagcccagcagatcgtccagaggaagctgcgcgtgcagtcggaatcaggggtggagtat
ttcgagctgaaggaggtgaccggagatctggtgattaaacagaaaatcgacagggagcag
ctgtgtgagctgaggtcatcgtgctcactgcacctgcagctgctcgtggagaaccccctg
cagatccaccgggccgtggtggacgttctggacgtgaatgacaacgctccgaggttttcc
accagcaccatctccctggaggtgtccgaggcggcctcgccggggacgcggttccgtctg
gagagcgcgcacgatccagacgtgggtgccaactctttacgcacgtaccagctggcagcg
aacgacttcttcatcttaaaagtggaaactaaaagcgacggcagcaagtttccagagctg
gtggtggacaaggctttggacagggaggcgcgggcgtcgttccgcctgatgctcacggct
gtggatggggggcagccggagaaatctggctccactcttctgctcattaaaatcctggat
gtgaacgacaacgcgccggtctttgaagagccggtgaagaaagtcaccctgctggaaact
gtggcactcggcactttagtcacgaaattaaacgcgacggacgcggatgcgggcagcaac
ggggacatatccttcctgttcggtaaatacacgtcggagcgcgtgctccagctgttcagc
gtggactctaaaagcggagagatccgtgtgaagggctccgtggattatgaaaagggcgca
tcttatcacatcaccgtgcaggccagagatgggggctcccccgccatggagggatcctgc
aacgtcatagtggacgtcactgatgagaacgacaacgcgccggaggtgacgctgacgtca
ctgacaagccccatcaaagaagactcggatccagggactgtgatagccctcataagtgcc
agggatctggactctggcgttaatgggcaggttacattaactatccccccagggttgcct
tttaaactgaactcagcttttggcatgcattataatctgatcactgccagcagactggac
cgtgagactgtcccagagtacacggtggtcatcaaggccactgatgctggctccccgcct
ctttcatcacaaatatcctttgtggtgaagctctcagatgtaaatgacaaccctcccatc
ttctcccagccttcatactccgtggacatccctgaaaacaacgcccccagctcccccatc
actgctgtgtctgccacagacccagacctaggtgagaatgctcacgtctccttttccatc
cttcccagcatggtccagggctcacccatatcatcctatgtgtatattaacccagagaca
ggacacatctacagcatgcgctccctggatcacgagcagcttaaaaacttccgcattgag
gtgcaggcccaggacgctggggtgcccccacggacgacgaacgtcactgtgcatgtgttt
gtggtggatgtgaatgacaatgcgccagtgatggttcacccctcccaccctaaagacaaa
agactgcagctggctgtgccaccatctgctggccctggtcacctcataaataaactggtg
gcagtggatgcagacagtgggcacaatgcgtggttgttctactcaatcgcacccggacca
aatgttggcatgttccgcattggggcccacaccggggagctccgcacagcccgcaagcta
gcagaagaggaagggggctcagcttatgatataacagtggtcatccaggataatggtgat
ccaccaaagtccagctctgtgaacattacagtaactgtggacgagaaggctgcagccaat
gaagctcctgttatcccccaccacaaccagttctaccaccgcaccgggatgcctgacatc
actctgtacctcatcatctctctcgcctgcgtgtcaggcgttgcgtttattacgtttgtg
gttttcatggtgcgctgcctgaggcaccgggacccaatgctgggggactccgagtgctgc
ttctgctgctacgatcgccacaggcccagccgctaccaccagaggcccagcaaagacctg
cacctgcagctcaacactgatggacctatacgatacatggaggtggtgggaggcccccag
gatccacacatgcgcacctacaggccctgctactccaccatatccagccgaagtgacttt
gtatttatgaaaacacccatgctgagccacaacaacacactcaacacgacgctcagcagg
aagcagcttatgaactcagtcagtgagtttagggagtttccatttgcccatgtttgtgtt
caaaaagattgtgtgaagcaggagttttccaaaaatccccacatgccatacggtacacaa
atacgatggacaacgaagaatgggacaagggcaactggaggacctgaggttgccatggga
actggtccctggccccagccccctactgaagccgagcagcttcaggcgctgatggctgca
gccaacgaagtaagcgaggccacggccaccctcgggcccggcaccatgggtctgagcacc
cggtacagcccccagttcaccctgcagcatgtgccggactaccgccagaacgtctacatc
cccggcagcacggccaccctcacctccaacccccagcagcagcaagccttggctcagcag
gccacgcagcaggcgttgcccccgcctcagtcctcgggccaggccgaaccccccaaggcg
gcccagacccccgcctccaagaagaagtccaccaagaaggaaaagaagtaa

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