Nematolebias whitei (Rio pearlfish): 119409322
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Entry
119409322 CDS
T08042
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119409322 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119409322 (phc1)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119409322 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119409322
NCBI-ProteinID:
XP_037532125
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All DBs
Position
5:complement(15290246..15299414)
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AA seq
783 aa
AA seq
DB search
MDTSEDQNASGTNGNPQTSGNSRAPQIAHMSLCERQAVQALQALQRQPNAAQYFQQLMLQ
QQINNVQLNTLAAVQQATLAASRQSNTSSHSMSQAPTTVNLSTTSTGGTMSSPRPHGPVT
SAATTALNQSVLLGGNSTGQGQMYLRVNRSLRAPLASQLIFMPGGTTATVAAVAQTQPQQ
QQHESAATTATVQSDCDQVQNLALHCASNPKAAAVKSEISDWKDAASFPLSPQQQSFPQT
AQQQQVQPQQQQMAKTSFNQQSVSNSMAVKTGNQSSITVTPAASVAPSPSSSSPALPLSQ
LLLSSSAAPVILVPSSNVTTSTQCYPIGSVAPKTNINTQTLVVHPVQQASTTMDKGPVPI
QPKTAQGHRLPLHLSPRNLPPILPAPPSNSQVTAGGHNPPHIPVQLVGARQGVAGNAQAV
ALTQTRSSTAQDSPSGGTVTSVSNNTAVTKPVVGSLKRKSECDAANDMAEADSAPMKDCA
PPLSPAPTKDSTPSVESIFSSPPTLSLPPPLSRVGHGDKDRLPVPQAVVKPQVLTHLIEG
FVIQEGAEPFPVAGFLKDRDFALVGRTENGPPLLKCEYCGCLAPASQFRGSKRFCSNTCA
KRYNVSCSQHYKTSRGRSGGGLPPRPAAAVSSARPKGSSGKSSSNTAHNKISNKRLSVKC
NSESSRSEDMSSDGEEEDSPSLSPSSSSRSCSRAEHSAPQSDSSAPLDGANFLSATPAQW
SVEEVCKFVSSLQGCEELAAQFLSQEIDGQALLLLREEHLISTMNIKLGPALKICASINS
LRE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagcgaagaccaaaatgcaagcggcaccaatggaaatcctcagacgagtggg
aactctcgagccccccagatagcccacatgtctttatgtgaaagacaagctgtgcaggct
ctccaggcactgcaaagacagcctaatgcagcgcagtacttccagcagctcatgttgcaa
cagcagatcaacaatgtgcagctcaacaccttggctgctgtgcaacaggccacgcttgca
gctagtcgccagtccaatacatcaagtcatagcatgtcccaagctcccaccactgtcaac
ctaagcactacatctacaggtgggacgatgagcagtcctcgtccacacggtccagtcacc
tctgcagcaaccacagccctaaaccagtcggtgctgctgggtggaaactcaacaggccag
gggcagatgtaccttagagtcaaccgttctcttagagctccacttgcctctcagctcatt
ttcatgcctggtgggacaacagctacggtggcggctgttgctcagacacaaccacagcag
cagcagcacgaatctgctgccaccaccgcaactgtccagtctgactgtgatcaggtgcag
aatctggctctacactgtgcttccaaccccaaagcagctgctgtgaaatcagaaatttca
gattggaaagatgctgctagtttcccactctctccgcagcaacagagtttcccccaaacg
gctcagcagcagcaagtgcaaccccaacaacagcagatggcaaaaaccagctttaaccaa
cagtctgtctctaattctatggctgtgaagactggaaaccaatcttccataacggtcact
cctgctgcctccgtcgctccgtcgccctcttcatcatctcctgcacttcctctgtctcag
ctgctcctgagctcctctgctgctccggtcatcttggtgccttcgtccaatgtaaccacc
tccacccagtgctatccaattggctcagtggccccaaagaccaacattaacactcagact
ctggtggtgcaccccgtacaacaggccagcactacaatggacaaaggtcctgttccaatc
caacccaaaactgcccagggacaccgcttaccgctccatctgtctccccgaaacttgcct
cccattctcccagctccaccaagcaacagtcaggtcaccgcagggggccacaaccctccc
cacatccctgtgcagctggtgggagccaggcaaggcgtggcaggaaacgcacaagctgtg
gctctgacccagacccgaagcagcacagcccaggacagtccatcaggtgggaccgttacg
tcagtctccaacaacacagctgtgacaaaaccagtcgttggctctttgaagagaaaatct
gaatgtgacgcagcaaacgacatggcagaagcagattctgcacccatgaaagactgtgct
cctcctttatctccagctccaacaaaggactcgactccttcagtggaatctatattctcg
tctcctccgactctctctttgcctccgccattgtccagagttggacacggggacaaagac
agactgcctgtgccccaagcagtggtcaagcctcaggttctcactcacctcattgaggga
tttgtgattcaagaaggagctgaacccttccctgtcgccgggttcctcaaagacagagat
tttgccctggttggacgcaccgagaacggacccccattgttgaaatgtgagtactgtgga
tgcctcgctccagccagccagttcaggggatccaagaggttctgttccaatacttgtgct
aaaaggtataacgtgagctgcagccaacactacaagaccagcagagggcgaagtggtggg
gggctgccgccacgtccagcggccgcagtgagctctgcacgacccaagggttcttctggc
aagagcagttctaacaccgcccacaataaaatatcaaacaagcgtctttctgtcaagtgc
aactctgagtccagccgctcagaagacatgtccagcgatggggaggaagaggactctcct
tctctgtccccgtcttcctcctcgcgctcctgctccagagccgagcacagcgcccctcag
tccgacagctcggctccgctagacggagccaacttcctgtctgcgacgccggctcagtgg
agcgtggaggaagtctgcaagtttgtctcctcgcttcaaggttgcgaggagctggctgcc
cagtttctgtcgcaggaaatagacgggcaggctctgcttcttctgcgagaggaacatctc
atttccaccatgaatattaaactgggtccggctctcaagatctgtgcctcaatcaacagt
ctgcgcgagtaa
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