Nematolebias whitei (Rio pearlfish): 119410006
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Entry
119410006 CDS
T08042
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00310
Lysine degradation
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119410006 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119410006 (setdb1b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
119410006 (setdb1b)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119410006 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119410006 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
119410006
NCBI-ProteinID:
XP_037532836
LinkDB
All DBs
Position
5:complement(16717570..16735787)
Genome browser
AA seq
1276 aa
AA seq
DB search
MENNERMEVDGWDSSLEEELGVSLDDLKKLIEEAVEQSEIVQKKKAQLKDLKQWVEQKEE
EEAKTERLLNDANDSILECEMLVRAAYEKNGLVYRESSSEDEGGGTNRRTSEVIEIDDDD
DDDVIAVGCLVPPKKILTPSKDPGLKEASAVLQKTSQQVNKLALMVNKPSPGAQLLRSSA
QPSAQSGIQSSAPTVFVSQAPSQAMTQPNPNLKEDELKVGMTILGKKRTKTWHRGTLVAI
NTIGNSTFKYKVRFDKGKSLLSGNHVAFEYNPTLESLFVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVILPELYPVCRPLKRTWEDIEDASCRDFIEEYISAYP
SRPMVLLKVGQIIKTEWEGTWWKSRVEEVDGSLVKILFLEDKRSEWIYRGSTRLEPMFNL
KMTSATTHEKKLAGHQRTRPNMGALRSKGPVVQYTGVEHVGASPGQAPQASPSQPSTAPQ
SQQPLQLQQPPVPQQLPVPQQPPVPQQPPVPQQPPLPQQTSQTLLIVQPQQTPQPTQTTH
LQYIQNKHQMAKKSTSPFVPGVGGTHASKILLSSSSSAIFSGGKILITTTAPTSSSTPSY
QRQQPTVIAPHPPVTHAMVTIPQHPSYRAPTDRIFYLAHTCQPTCLNRVRPVKQDMHLGK
NPLLTPLLYDFRRMTSRRKVNRKVSFHVTYKAPCGLCLRNMSEIQNYLFQSRCDFIFLEM
FCLDPYVLVDRPFQPQRPFYYIPDITSGKEDIALSCVNEIDTTPPPKVAYSKERIPEDGV
FINTSADYLVGCDCTDGCQDKSKCFCHQLTLQATACTPGGQVNTNAGYLYKRLEECLPTG
IYECNKRCKCCVQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKIL
TDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRIKIQPSALV
SGTNAGRHPKKVKSSSSSNRSNDEKDSKSDESDSSDDTFVKDNYFNSSSVWRSYTTRGQV
KGTKEGSQDSKDGMSVSGGAAGEKSLSIPEETGKSKVASWLTSQGLKKDSEDKKCVGIPQ
NTPVQTKKQDVMTLSDSDDVQTISSGSEDNKERDKPAPVSGPTVTKKQVAVKSTRGIALK
NSHSMMVKTGTPGGGAGPSSQGAKHGQQGQPGGGGENAPRNTRLFYDGEESCYIIDAKLE
GNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGK
ELLCCCGSTECRGRLL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaatgagaggatggaggttgacggctgggactccagtctggaggaagaactg
ggtgtttccttggatgacctgaagaagttgattgaagaagcagtggagcagagtgagatc
gtgcaaaagaaaaaagctcagttgaaagaccttaagcaatgggtcgagcagaaagaggag
gaggaggcaaagacagaaaggcttctcaacgatgcaaacgattctatattggagtgcgag
atgctggtgagggcagcttacgaaaagaacggacttgtctaccgcgaaagcagctcggaa
gatgaaggcggcggaacaaacagacggacctctgaagtgattgagatagacgacgatgac
gacgatgatgtcattgctgttggttgtttggttcctccaaagaaaattttaactccttcc
aaagatcctgggttaaaagaagcttctgcagttttacagaaaacctcccagcaggtgaac
aagttggccctaatggtgaacaagccttcaccaggagctcagctgctccgctcttcagcg
cagccttcagctcagtccgggattcagagttcagcaccaacagtatttgtatcacaggct
ccatctcaggccatgacccagccaaatccgaacctaaaagaagatgaactaaaagttggg
atgaccattctggggaaaaaacgcaccaaaacgtggcacagaggcaccctcgttgctatc
aacactattggaaatagtacatttaaatataaagtgaggtttgataaaggcaagagtttg
ctgtctgggaaccacgtggcttttgaatataacccgactctggagagcctgtttgtcggg
gcccgtgttgtcgctaagtacaaagatggaaacctagtgtggctctacgcgggaattgta
gcagagatgcccaacaacaagaaccgcatgaggtttttgatcttttttgatgatggctat
gcttcttatgtgatactgcctgaactttacccagtttgcagaccactaaaacgtacttgg
gaagacatagaggacgcatcctgtcgagacttcatcgaggagtacatttccgcctatccc
agcaggccgatggtgctcctgaaggtcggccagataatcaagacggagtgggagggaacg
tggtggaagagccgagtggaggaggtggacggcagcttggtcaaaattctctttttggaa
gacaaaaggagtgaatggatttacagaggatccaccagattggagcccatgtttaatctg
aaaatgacttccgcaaccacccatgagaagaagctggccggccaccaaaggacaagacca
aacatgggagcattgaggagtaaaggcccagtagttcagtacactggtgttgagcatgtt
ggagcatctcctggccaggcgccgcaggcatcacccagtcagccttcgacagcgccacag
tcccagcagccccttcaactccagcagcctcctgtgccccagcagcttcctgtgcctcag
cagcctcctgttccccagcagcctcctgtgccccagcagccccctctgccccagcaaacc
tctcaaaccctgcttatcgttcagccacagcaaactcctcagcccactcaaaccacacat
cttcaatatattcagaataagcatcagatggcaaagaagagcacttctccatttgtccct
ggggtgggaggaacacatgcttctaaaatattgctgtcttcatcaagttctgccatcttc
tcaggtggaaaaatattgattactacaactgctcccacatcctcctccacgccttcgtac
cagagacagcaacccactgtgattgctccccatccccctgtgacacatgcaatggtcacc
attccccaacatccctcctacagagccccaacggacagaatcttctacctggcacacaca
tgtcagcctacatgtctgaaccgcgttcgaccagtcaaacaagacatgcacctaggaaag
aaccccctcctcactcctctgctgtatgatttcagacgcatgacgagtcgacgcaaagtc
aaccgcaaagtttctttccatgtgacctacaaggctccatgcggactttgccttcgcaac
atgtcagagatacagaattacctcttccagtctcgctgtgactttatattcttagagatg
ttctgtctagacccctatgtgctcgtggatcgacccttccagccacaaagacccttctat
tacattccagacatcaccagtggaaaggaggacatcgctctctcctgtgtcaacgagatt
gataccaccccacctcctaaagtagcctacagtaaagagcgtattcctgaagatggcgta
tttattaacaccagtgcagattacctggttgggtgtgattgcacagacggctgtcaagac
aagtccaaatgtttctgccaccagctgaccctgcaggctacagcttgtacacccggagga
caggtcaacactaacgcaggatatttgtacaaacgattagaggagtgcttgccaacaggg
atctacgagtgtaataaaaggtgcaaatgttgtgttcagatgtgcaccaaccggctggtg
cagcacggcctgcaggtccgccttcagctctttaagactcagaacaaaggctggggcatc
cggtgtctggatgatatcgctaagggctcttttgtctgcatttatgctggtaaaatcttg
actgatgacttcgctgacaaagaaggtctagagatgggtgatgagtattttgctaacctg
gaccacatagagagtgtggagaacttcaaggaaggctacgagagcgaggctcactgctca
gacagcgagggaagcggagtggatgtgtccaggataaaaatccaaccgtctgctttagtt
tcgggcaccaatgcgggacgacatcccaaaaaggtcaaaagctcgagctcttcaaaccgc
agcaacgatgaaaaagactcgaagagtgacgaaagcgacagttcagacgacacgtttgtg
aaggacaactatttcaactccagttctgtgtggaggagttacaccacacgaggtcaagtc
aagggcaccaaggaaggaagtcaagacagtaaagatggaatgagtgtttctggaggagca
gctggtgaaaagtccctgtcgatcccagaagagacggggaaaagcaaagtggcttcctgg
ctaacaagccaggggctcaagaaggactctgaagataagaagtgtgttggaattcctcaa
aatacaccagttcaaacgaagaagcaggatgtgatgactctctctgacagcgatgatgtc
cagaccatcagctcaggatctgaggacaacaaggaacgagacaaacccgctccagtttct
ggccccactgtgaccaaaaagcaggtggcggtgaaatccacccgaggcatcgccctgaag
aacagccacagcatgatggtgaagacaggaacacctggagggggggcgggaccgagcagc
cagggggccaaacatggacagcaggggcagcctggaggagggggagaaaacgctcccagg
aacactcgcctgttctacgacggcgaagaatcctgctacatcatcgatgccaagctggag
ggaaaccttgggcggtacctcaaccacagctgcagtcctaacctctttgtccagaacgtg
tttgtggacacgcatgacctgcgattcccctgggtggcgttctttgccagcaagcgtatc
cgggccggcaccgagctgacctgggactacaactacgaggtggggagcgtggaaggtaaa
gagctgctgtgctgctgcggatccacagagtgcagaggacgactgctgtga
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integrated database retrieval system
