Nematolebias whitei (Rio pearlfish): 119411202
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Entry
119411202 CDS
T08042
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00900
Terpenoid backbone biosynthesis
nwh01100
Metabolic pathways
Module
nwh_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
119411202 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nwh01006
]
119411202 (ggps1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
119411202 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
119411202 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
119411202 (ggps1)
Prenyltransferases [BR:
nwh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
119411202 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
119411202
NCBI-ProteinID:
XP_037534064
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All DBs
Position
1:complement(49084689..49100043)
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AA seq
315 aa
AA seq
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MDGASAAASDRILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIQVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLVLEHPEAVHVFTRQL
LELHRGQGLDIHWRDTYTCPTEEEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLFFQIRDDYANLSSREYSENKSYCEDLTEGKFSFPTIHAIWSQPDSTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRDLEAEAYRLIQEFGGNPQLESLVKHLSQMHHEAE
AAAESREEAHSGQNH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgcctctgcagccgcctctgaccggattctgctcgaaccgtacaagtactta
ctgcaactgccgggaaaacaagtgaggacaaaactctcccaagcatttaaccactggctc
aatgttcccgaagacaaactacaggtgatcatccaggtgacggagatgctccacaacgcc
agcttgctgatcgacgacattgaggacagctccaagctgcgccgtggcttccccgtggcg
cacagcatctacggcatcccctcggtcatcaactccgccaactacgtctacttcctgggc
ttggaaaaggtgctggtgctggagcaccccgaggccgtgcacgtgttcacccgccagctg
ctggagctgcaccgcggccagggcctggacatccactggagggacacctacacctgtccc
acagaggaggagtaccgcaacatggtgctgcagaagaccggcgggctcttcggcctggcc
gtgggcctcatgcagctcttctcggactggaaacaggacctcaaacccctcctggacaca
ctcgggctcttttttcagatccgcgacgactacgccaacctgagctcccgcgagtacagc
gagaacaagagctactgcgaagacctgaccgagggcaagttctccttcccgaccatccac
gccatatggtcgcagccggacagcacgcaggtgcagaacatcctgcggcagcgcaccgag
aacatggacatcaaacggtactgcgtggactacttggagaaagtgggttcgttcgcgtac
actcgtcagaccctgcgggacctggaggctgaggcgtaccggctcattcaggagttcggt
gggaaccctcagctggagagcctggtcaaacatctcagccagatgcatcatgaagctgaa
gctgcagcagagtccagggaggaagcacactccggccagaaccactga
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