Nematolebias whitei (Rio pearlfish): 119411367
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Entry
119411367 CDS
T08042
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119411367 (trpc6b)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119411367 (trpc6b)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
RIN1
Motif
Other DBs
NCBI-GeneID:
119411367
NCBI-ProteinID:
XP_037534237
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Position
6:42645794..42656489
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AA seq
811 aa
AA seq
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MELLGTKPWRRTARGAGYLFHSQPSASLPSTEERFLEAVENGNLPEVRRLLKELPLLNVN
CVNDLGQNALQLAAAKGHLEVCKLLLEKKELARIGEALLLAISKGYIRIVEAMLSHKVFA
DVGRLTNSLSQLETRDEVFSCDNSGTYFSHDTTPLILASQCHKYEIVHILLTKGVRIERP
HDCFCQCRTCCEQHGCDAFSHSKSRISAYKGLASPAYLCLSSPDPVMAALELSKELAVLA
NTEKEFKNEYEKLSLQCKDFVVGLLDLCRNTQEVEAVLNGDAESWPDSDTLCRPNLIRLK
HVIKYEVKKFVAHPNCQQQLRSIWYENLSGLRQQTLAFKILLFMGVAAGLPIMAFIYWVV
PSSKLGRLMCAPFLKFVAHTASFMIFLCLLVLNAADRFAGTSLLPNMTAHDYPTQLFRMK
TTSFTWMEILIISWVIGKIWEECKVIWSQDIREYISEPWKLLDFSILSIFLSSFVARLMA
FWHARSAQGYIDEHQADQSNFTLPLEVQYFQLARIHWTPSDPQLISEGLYAIAVVLSFCR
VAYILPASERFGPLQISLGRTVKDIFKFMVIFTTVFVAFMVGMFNLYSYYLGAKHNVAFT
TVEESFKTLFWAIFGLSGVKSVVININHKFIENTGYVLYGVYNFTMVIVLLNMLIAMFNS
SFHEIQDDADVEWKFARAKLWFSYFDHGRTLPVPFNLVPSPKSVVSLVMRLKKLLWDVPS
SKREANPNDEMELNNKVMACLIKRFILKAQTDPDKDEVNEGELKAIKQDISNLRCELLER
GDQSMNPLAELVRELDEVVCYEQDESVSVIN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaacttttaggcaccaaaccttggagacggacggctcggggagctggctacctgttt
cactctcagccgtcagcctctcttccttcgacagaggagcgttttctggaagctgtggaa
aatggaaatcttcctgaagtgaggcggctcctgaaggagcttccactactcaatgtcaac
tgtgttaacgacttgggtcagaatgcactgcagcttgcagctgccaagggacatttagaa
gtttgcaaacttcttcttgagaagaaagaacttgccagaataggggaagctttgctgttg
gccatcagtaaaggttacatccgtatagtagaggccatgttaagccacaaggtctttgca
gatgttgggaggctgacaaacagtctcagccagttggagacacgggatgaggttttttct
tgtgacaacagtggcacatatttctctcatgacaccacccccctcatcctggcttcacag
tgccacaagtatgaaatagtgcatatacttctcacaaagggggtccgtattgagcgtccc
catgactgcttctgtcagtgcaggacttgttgtgagcagcacggatgtgatgcttttagc
cactcaaagtctcgaatcagtgcgtacaaaggtctggccagtccagcgtacctttgtctc
tccagtccagaccccgtgatggcagctttggagctgagcaaggagctcgcagtcctggca
aacaccgaaaaggagtttaagaacgagtacgagaaactgtcgctgcagtgcaaagacttt
gtggtgggactcctggatctgtgtcgaaacacacaggaagtggaggccgtcttaaacggt
gacgccgagtcctggcctgactccgacaccttgtgcagaccaaacctcatcaggttaaaa
catgtaataaaatacgaagtaaaaaagtttgtggctcatccaaactgccaacagcagctg
cgctccatctggtacgagaacttgtccggactacgccagcaaacgttggcctttaaaatt
cttctcttcatgggtgtagctgctggactgcctatcatggcttttatttactgggtggta
ccgtcaagtaaactgggcagactcatgtgtgcacccttcctgaagttcgtggctcacacg
gcttccttcatgatctttctttgtctgctggtcctgaacgctgcagaccgcttcgcagga
acgtcactgctgcccaacatgaccgcccacgactaccccactcagctgttcaggatgaag
accacatccttcacctggatggagattctcatcatttcttgggtcataggtaaaatatgg
gaggagtgcaaagttatttggtcccaagacatcagagaatacatttcagaaccctggaag
cttctcgacttcagtattttgtccattttcttgagttccttcgttgccagattaatggct
ttctggcacgcacgttctgctcaaggttacattgacgagcaccaggctgaccagtccaac
ttcactttgccccttgaggtacaatatttccagctggcgagaattcactggacgccctca
gacccgcagctcatttccgagggcctctacgcgatcgctgtggttctgagtttctgtcgc
gtcgcgtacatcctgcctgccagcgagaggttcggacctctgcagatctccctgggcaga
acagtgaaagacatttttaaattcatggtgattttcacaacagtttttgttgcattcatg
gtgggaatgttcaacctgtactcgtactacctcggggccaagcacaacgttgcgtttacg
acagtggaagaaagtttcaaaaccttgttctgggccatctttggactgtcaggagtgaag
tcagtggtcattaacatcaaccacaagttcatagagaacacaggttatgttctttatggg
gtgtacaacttcaccatggtgattgttttgctcaatatgctcatagcgatgttcaacagc
tccttccatgaaattcaggatgatgcggatgtggagtggaaatttgccagagccaaactg
tggttctcttatttcgaccacggtcgaacgctgccggtgccctttaacctcgtacccagt
cccaaatctgttgtttcccttgtgatgagactgaagaaacttctgtgggatgtaccgtca
agcaaaagagaagccaacccaaatgatgagatggaactgaacaataaagtaatggcttgc
ctcattaaaagattcatattaaaagcacagacagatccagataaggatgaagtgaatgaa
ggtgagctgaaagccatcaaacaggacatctccaaccttcgatgtgagctgctggaaaga
ggagaccagagcatgaatccactggctgagctcgtcagagagctggatgaggttgtttgt
tacgagcaggacgaatcagtcagtgtaatcaactga
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