Nematolebias whitei (Rio pearlfish): 119411937
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Entry
119411937 CDS
T08042
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein homolog
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119411937
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
119411937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
119411937
NCBI-ProteinID:
XP_037534839
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Position
1:complement(56080977..56083817)
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AA seq
927 aa
AA seq
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MSRFELEELSRFGDSADNQELTDILSSSKEEHFNSLSDVRVSPDGRHIHIILRNPQVGLM
TYDKYERPLPTQNRKKLELFSPQTVPVVDICYLDHSNNRSRAAVAAVIYENGKAEFWCFQ
ESKAGWRLLQTSDLCNSPRARVVSVCARSSFITWCEERPPSESSTRNKLRYCVCRRDFEV
EEGAVILAGVKIILHNNPKFAVISSGENVHLLPDLKAKPLSCIFKFFLTWCPHHDSFTVS
AVGKNTPIKRLSSKECDFKKLITDCLGYLSALEPPEIITFAPTDCGGLLLLLSNGWLWLL
QKDGTMRQVHKLPENCLVKHGTHANICAYINVVALIMGQNLHLIELSCGRELQRIVLKRG
GVLYANQTERQTPHLLSETGLFVVVDTKTDSADCSFKLKPPGFSMVESVHPGALLIEAVF
EEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILRSFLSTGLTKKGAELLQNGEGE
FIAGQDKLMASLEGELKALVSLEELKGSLVRGGTKEVEVVCETLVEKEVVRLLSSSELDK
EELLYLNSIFSIFPCQAWRAVQAALQLHCNGEGSLSSRAPSDVWKAVLSHQLSSPTASRL
LLNGQPKFNHSRKGDHTSKGKPPTSPAVLPVFELLCQSVLRFQPTWLPRVLELAQQQQGS
ASLGLSLASSSWSFSSGRGGEGENNVPLYKRALCVLSGISRDGDQHRNLEVELLLVGGRP
NAILQALRILMNERQWERVTQVAQQFCKQSPLLNKEIFTTLLCEVAQHRDLDPYLDLLWT
LCPEDFTVTTILNLVLKSLPSPNTSSHPASFSMSHTNSSSPPFADPHSSSQLTIGLLKPL
LRKVLQSETKPSQRYVDILQSPSYPPPALPRQPTEQASAVTHPSRDSSLCSSVTAALRAE
TPEQRPSTHATIQRSSIALSAAPLGFD
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtttgagttggaggagttgtcacgtttcggggactccgcggacaaccaggag
ctgacggacatattaagctcgtctaaggaggagcacttcaacagcctgtcggatgttcgt
gtgagcccagatggacgtcacatccatatcatcctccgcaaccctcaggtcggtcttatg
acttatgacaaatacgaaagacccctgccgactcagaaccgcaagaaactggagttgttt
tctccacaaactgttccggtcgtggatatttgctacttggatcattccaacaaccgcagc
cgagcggcggtcgctgcagtgatttatgagaatggaaaagcagagttttggtgctttcag
gagagcaaggctggctggcgtctcctgcagacatcagatctgtgcaacagcccccgggcc
agagttgtgtctgtctgtgctcgctccagttttatcacctggtgtgaggagagacccccc
tcagagagctccacgaggaacaagttaaggtactgtgtttgcagacgtgactttgaggtc
gaggaaggggctgtcatcttggcaggggtgaaaattatccttcacaacaatcctaaattc
gctgtgatcagctcgggtgagaacgtgcaccttcttcctgacctgaaagcgaagccgctg
tcgtgcatctttaaattcttcctcacctggtgtcctcatcacgactccttcactgtcagc
gccgtgggtaaaaacacccccatcaaaaggctttcatccaaagagtgtgactttaagaaa
ctgatcactgactgtttaggatatttatcggctctggagccacctgagattatcactttc
gcgcctacggactgtggaggtctgctgcttctcctcagcaatggctggctgtggctcctg
cagaaagacggtacaatgagacaagtgcacaaactgccggagaactgtttggtgaaacat
ggcacacatgccaacatatgcgcgtacataaatgttgtggcgctaataatggggcaaaac
ctgcatctgatagagttgagttgtggcagggaactgcaaaggattgtgttgaagagaggg
ggtgttttatatgcaaaccagaccgaaaggcaaactccacatctgctctcagaaactgga
ctttttgtggtagtggacacaaaaacagactccgcagactgcagttttaagctaaagcct
cctggtttcagtatggttgagagtgttcatcctggtgccctcttgatagaagcggttttt
gaggaggcttgtaaatactaccagcagaggagcctgagcagcacccagctcaccgtggac
acgttaaagaaaggaggaagattccaggctcccatctctttagcctccatcctcaggagc
ttcctcagcacgggtttgacgaagaagggtgcagagctgctgcagaacggagaaggggaa
tttattgcaggtcaagacaagctcatggcctctctggagggcgagctcaaggccctcgtt
tctctggaggagctgaaggggagtttagtgaggggaggcactaaagaggtagaggtggtg
tgtgagactctagtggagaaagaagtggtgagactgctgtcatcttctgagttggataaa
gaggagctgctgtaccttaactcaatcttcagcatcttcccctgccaagcatggagggct
gtccaggctgcacttcagctgcactgcaacggggagggctctctgtccagcagggctccg
tcagacgtgtggaaagctgtcctcagtcatcagctgtccagccctacagcctcccgtttg
cttctaaacgggcagccgaaattcaaccacagccgtaaaggtgatcatacttctaaaggc
aaaccccccacctctccagctgtcctgccggtgtttgagctcctctgtcagtcagttctt
cgcttccagcccacgtggctccccagagtccttgagctcgcccagcagcaacaaggctcc
gcgagtttgggtctgagcctcgcttcttcctcctggagtttttccagtgggagaggaggg
gagggcgagaacaacgtgcctttgtataaacgagcgctgtgcgtcttgtccggcataagc
cgggacggagaccagcaccggaacttggaggtggagctgctgctggtcggtggacggccc
aacgccatcctgcaggctctgaggatcctgatgaacgagcggcagtgggagcgggtcacc
caggtggcccagcagttctgcaaacagagcccgttgctcaacaaggagatttttaccacg
ctgctctgcgaggtggctcagcatagagatctggacccttacctggacctgctgtggaca
ctgtgccctgaagacttcaccgtcaccacaatccttaacttggtgctcaaaagcctcccc
tctcctaacacttcatcccaccccgcttctttctctatgtcccacacaaactcctcgtct
cctccttttgcagaccctcacagcagcagccagctgaccatcgggctgttgaagcccctg
ctgaggaaagtgcttcagagtgagacgaagccaagtcagcgttacgttgacatcctacaa
tccccgtcttacccccctccagctcttcctcgccagcccacagagcaggcgagcgccgtc
acacacccgagcagagactcgtctctgtgcagcagcgtcacggcggctcttcgtgcagaa
acacccgagcagcggccgtccacccacgccaccattcaaaggtccagcattgcactttct
gctgccccgcttggatttgattaa
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