Nematolebias whitei (Rio pearlfish): 119412223
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Entry
119412223 CDS
T08042
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04060
Cytokine-cytokine receptor interaction
nwh04672
Intestinal immune network for IgA production
nwh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119412223 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119412223 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119412223 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nwh04052
]
119412223 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119412223 (cxcl12a)
Cytokines and neuropeptides [BR:
nwh04052
]
Cytokines
Chemokines
119412223 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Chemokines
119412223 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
119412223
NCBI-ProteinID:
XP_037535137
LinkDB
All DBs
Position
1:55596436..55603186
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AA seq
100 aa
AA seq
DB search
MKMDMKLLTVVAALTVLMFAPGSQAKPISLVERCTCRSAVNNVPRGYIRELRFIHTPNCP
FQVIAKLKTNKEVCVNPEIRWLQQYLKNAINKMKKSKQGI
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatgaagctgctgacagtcgtggctgcgctgactgtgctcatgtttgca
cctggttctcaagcaaagcccatcagcctggttgagcgttgtacctgccgttcagctgtt
aacaacgtcccacgaggctacattcgagagctccggttcatccacacacctaactgcccc
ttccaagtcattgctaagctgaagacaaacaaggaagtgtgtgtgaaccctgagatccgg
tggctgcagcagtatctgaagaacgccatcaacaagatgaagaaatccaagcagggcatt
tga
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