Nematolebias whitei (Rio pearlfish): 119412810
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Entry
119412810 CDS
T08042
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119412810
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119412810
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT_EZ
Symplekin_C
HEAT
Motif
Other DBs
NCBI-GeneID:
119412810
NCBI-ProteinID:
XP_037535772
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All DBs
Position
7:38213926..38224318
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AA seq
768 aa
AA seq
DB search
MIESNGSVFFTNGFSKSFSLEKNINNPQTLNNLKKTTRRRNATYSSSRYENGYGVVGSLA
MGQTNTSRSEPALAWHYAVPKLSVPPQRGPSNKSIYTKHRSSSNSQSVKRITSQLRQKNV
PNGLDQIQTQYPTLVPKSPGQLRTRQSMIASNGSSQIQTQYPTNVPNGSGPMKTRHSMIL
SNSSGQIQTQYPTNVPDGSGPVKTRHSMILSNSSGQIQTQYPTVVPNSPGQMIKMHRSTI
VPKSSGQTQTQHVKSSQTGITKTQPTIVTDGSTKTKENSGAKETISAAGITLKEAVEFLS
KDDENYQHCGASYIQHNTFISDTAKEEVLRLKGIPPLVNLLRSSSSQVKYTASATLRNLS
YKSDRNKEEIHRCNGILVAADQLRDSDSVELDKQLTGLLWNLSSADNLKPDLLKNALFAL
TERVRLPSTNKTATTERDPEVFFHATGCLRNLSSAKQESRQMMRKHQGLVDSLVGYIKEC
VDTRKDDESLVNCVCTLHNLTYKLESEAPVLFSKINALASNKPRSRSQNNVSTVGCFSSN
KSPEYEYTFDYPVSEDRKPSGASSLFHSTTLQSYLSLIDSCQREETQETCCKIMQNLTAN
ESVVSSVMSQMIVQKLNGMQIISPLLTSDKINLQKSAMALVANLMKNPNLHTAIGNRALP
ELVDVLKKGTDGANESDDTLAMACQSASTLLLNEPEFNKKCINLNLIESLKDISKNKYFP
KSSKAASILLLKMWSDKDLQSHLRKEGMTKNIFVNDITMAAYKSAQAI
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatctaatggaagtgtcttctttaccaatggcttctcgaaaagtttcagcctt
gagaagaacataaataatcctcaaacactgaacaacttaaaaaaaacaaccaggaggagg
aacgctacttattctagctctcgctatgagaatggctatggcgttgttggctccttggca
atgggtcaaaccaacaccagtcggagcgagcctgccctggcctggcactatgcggtgcca
aaactttctgttcctccacagagagggccctccaacaagagcatctacacaaagcacaga
agcagcagcaacagtcagtctgttaagaggatcacctcacagttgcgtcagaagaatgtt
ccaaatggtttagatcagatccaaacacagtatcctacacttgttccaaaaagtccaggg
cagctaagaacacgccagtctatgattgcttccaatggttcaagtcagatccaaacgcag
tatccgaccaacgttccaaatggttcaggaccaatgaaaacacgtcattctatgattctt
tcaaatagttcaggtcagatccaaacgcagtatcccaccaatgttccagatggttcagga
ccagtcaaaacacgtcattctatgattctttcaaatagttcaggtcagatccaaacacag
tatcccacagttgttccaaatagtccagggcagatgataaaaatgcatcgttctacgatt
gttccgaaaagttcaggtcagacccagacacagcatgtcaagagcagtcaaaccggtatt
acgaagacacagccaactattgtcaccgatgggtcaaccaagaccaaagaaaactctggg
gcaaaggaaaccatctcggctgctggtatcacgttgaaggaggctgtggagtttctttcc
aaggatgatgagaattaccagcactgtggagcctcctacattcagcacaacactttcatt
agtgacacggcaaaagaggaggtcctgaggctaaagggcatccctccgctggtgaatctg
ctgcgcagctccagttctcaagtcaaatacacagcctcggccaccctccgtaacttgtcc
tataagagtgatcgtaacaaagaggagatccatcgctgcaacggcatcctggtggctgct
gatcaactcagagactcagactctgtggagctcgacaaacaactgacaggtcttttgtgg
aatttatcctctgcagacaacctgaaaccggatctgttgaaaaatgctttgtttgctcta
acggagcgtgtgaggctgccttccacgaacaagaccgccacaactgagagagaccctgaa
gtcttctttcacgccacgggatgtctaagaaacctcagcagtgcgaagcaagagagcaga
cagatgatgaggaagcatcagggtttggtcgactctttagtgggttacattaaagaatgc
gtggatacgagaaaagatgatgagtctttagttaactgtgtgtgcaccctgcacaacctg
acatacaagctggagtctgaggctccggttctgttcagcaagatcaatgctttggcttct
aataaacccaggagccggagtcagaacaacgtcagcactgttggttgcttcagctcgaac
aaatctccagagtatgagtacacctttgattacccggtctcagaggatcggaaacccagc
ggtgccagctcgttgttccattccacaacgctgcagagctacctgtctttgatcgactcg
tgtcagcgcgaagagacgcaggaaacctgctgcaaaatcatgcagaatctcactgcaaac
gagagcgttgtctcgagtgtaatgagtcagatgattgtgcagaaactgaatggcatgcag
attatcagcccgcttctgacctcagacaaaatcaacttgcagaagagcgccatggctctg
gtggcaaacttgatgaagaacccaaatctgcacactgccatcggtaacagagccctccca
gagctggtggatgttcttaagaagggcacagatggagcgaatgagtccgacgacacactg
gccatggcctgccagtcagccagcactctgcttctgaatgaaccagagttcaacaagaaa
tgcataaacctaaacttgatagaatccctcaaagacatcagcaaaaacaaatatttcccg
aaatccagcaaagctgcatccattcttctcttgaaaatgtggtcggataaagatttgcag
agccatctgagaaaggaagggatgaccaagaatatctttgtgaatgacatcaccatggca
gcgtacaagtcggcccaagctatttaa
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