KEGG   Nematolebias whitei (Rio pearlfish): 119413782
Entry
119413782         CDS       T08042                                 
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082  ATP-dependent chromatin remodeling
nwh04145  Phagosome
nwh04210  Apoptosis
nwh04510  Focal adhesion
nwh04520  Adherens junction
nwh04530  Tight junction
nwh04810  Regulation of actin cytoskeleton
nwh04814  Motor proteins
nwh04820  Cytoskeleton in muscle cells
nwh05100  Bacterial invasion of epithelial cells
nwh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119413782
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119413782
  09143 Cell growth and death
   04210 Apoptosis
    119413782
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119413782
   04520 Adherens junction
    119413782
   04530 Tight junction
    119413782
  09142 Cell motility
   04814 Motor proteins
    119413782
   04820 Cytoskeleton in muscle cells
    119413782
   04810 Regulation of actin cytoskeleton
    119413782
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119413782
   05100 Bacterial invasion of epithelial cells
    119413782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwh03021]
    119413782
   03019 Messenger RNA biogenesis [BR:nwh03019]
    119413782
   03036 Chromosome and associated proteins [BR:nwh03036]
    119413782
   03029 Mitochondrial biogenesis [BR:nwh03029]
    119413782
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nwh04812]
    119413782
   04147 Exosome [BR:nwh04147]
    119413782
Transcription machinery [BR:nwh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119413782
Messenger RNA biogenesis [BR:nwh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     119413782
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     119413782
    NuA4 complex
     119413782
  Chromatin remodeling factors
   BAF complex
    119413782
   PBAF complex
    119413782
   GBAF(ncBAF) complex
    119413782
   SWR1 complex
    119413782
Mitochondrial biogenesis [BR:nwh03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    119413782
Cytoskeleton proteins [BR:nwh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     119413782
Exosome [BR:nwh04147]
 Exosomal proteins
  Proteins found in most exosomes
   119413782
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 119413782
NCBI-ProteinID: XP_037536773
LinkDB
Position
8:complement(3263553..3266566)
AA seq 375 aa
MDDDISALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggacgacgatatctccgctcttgttgttgacaatggctccggtatgtgtaaggccgga
tttgcgggggacgatgcgcctcgtgccgtcttcccttccattgttggacgccccagacac
cagggtgtgatggtcggtatgggacagaaggacagctacgtgggagacgaggctcagagt
aagcgaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctccgtgttgctcctgaagaa
catccagtcctgctgactgaagcaccactgaaccccaaagccaacagggagaagatgacc
cagatcatgttcgagaccttcaactctcctgccatgtacgtggccatccaggccgtcctg
tctctgtacgcctctggtcgtaccacaggtattgtgatggactctggtgacggtgtcagc
catactgtgcccatctacgagggttacgccctgcctcacgccatcctgcgtctggatctg
gctggcagagacctgacagactacctgatgaagatcctcacagagaggggctacagcttc
accaccactgctgagcgtgagattgttcgtgacatcaaggagaagctgtgctacgtggct
ttggactttgaccaggagatgcagacggcagcttcctcttcatcactggagaagagctat
gagcttcctgacggacaggtcatcacaatcggcaacgagaggttccgctgtcccgaggcg
ctcttccagccttcgttcatcggaatggagtctgctggtatccatgaaactacctacaac
agcatcatgaagtgtgacgtggacatccgtaaagacctgtacgccaacactgtcctgtct
ggaggtaccaccatgtaccctgggattgctgaccgcatgcagaaggagatcaccagcctg
gccccacccaccatgaaaattaagatcattgctcctccagagaggaagtactccgtctgg
atcggtggctccatcctggcctccctctccaccttccagcagatgtggatcagcaaacag
gaatacgatgagtccggcccagccatcgtccatcgcaagtgcttctaa

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