Nematolebias whitei (Rio pearlfish): 119413782
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Entry
119413782 CDS
T08042
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
nwh04145
Phagosome
nwh04210
Apoptosis
nwh04510
Focal adhesion
nwh04520
Adherens junction
nwh04530
Tight junction
nwh04810
Regulation of actin cytoskeleton
nwh04814
Motor proteins
nwh04820
Cytoskeleton in muscle cells
nwh05100
Bacterial invasion of epithelial cells
nwh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119413782
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119413782
09143 Cell growth and death
04210 Apoptosis
119413782
09144 Cellular community - eukaryotes
04510 Focal adhesion
119413782
04520 Adherens junction
119413782
04530 Tight junction
119413782
09142 Cell motility
04814 Motor proteins
119413782
04820 Cytoskeleton in muscle cells
119413782
04810 Regulation of actin cytoskeleton
119413782
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119413782
05100 Bacterial invasion of epithelial cells
119413782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119413782
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119413782
03036 Chromosome and associated proteins [BR:
nwh03036
]
119413782
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119413782
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119413782
04147 Exosome [BR:
nwh04147
]
119413782
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119413782
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119413782
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
119413782
NuA4 complex
119413782
Chromatin remodeling factors
BAF complex
119413782
PBAF complex
119413782
GBAF(ncBAF) complex
119413782
SWR1 complex
119413782
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
119413782
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
119413782
Exosome [BR:
nwh04147
]
Exosomal proteins
Proteins found in most exosomes
119413782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
119413782
NCBI-ProteinID:
XP_037536773
LinkDB
All DBs
Position
8:complement(3263553..3266566)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDDISALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatatctccgctcttgttgttgacaatggctccggtatgtgtaaggccgga
tttgcgggggacgatgcgcctcgtgccgtcttcccttccattgttggacgccccagacac
cagggtgtgatggtcggtatgggacagaaggacagctacgtgggagacgaggctcagagt
aagcgaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctccgtgttgctcctgaagaa
catccagtcctgctgactgaagcaccactgaaccccaaagccaacagggagaagatgacc
cagatcatgttcgagaccttcaactctcctgccatgtacgtggccatccaggccgtcctg
tctctgtacgcctctggtcgtaccacaggtattgtgatggactctggtgacggtgtcagc
catactgtgcccatctacgagggttacgccctgcctcacgccatcctgcgtctggatctg
gctggcagagacctgacagactacctgatgaagatcctcacagagaggggctacagcttc
accaccactgctgagcgtgagattgttcgtgacatcaaggagaagctgtgctacgtggct
ttggactttgaccaggagatgcagacggcagcttcctcttcatcactggagaagagctat
gagcttcctgacggacaggtcatcacaatcggcaacgagaggttccgctgtcccgaggcg
ctcttccagccttcgttcatcggaatggagtctgctggtatccatgaaactacctacaac
agcatcatgaagtgtgacgtggacatccgtaaagacctgtacgccaacactgtcctgtct
ggaggtaccaccatgtaccctgggattgctgaccgcatgcagaaggagatcaccagcctg
gccccacccaccatgaaaattaagatcattgctcctccagagaggaagtactccgtctgg
atcggtggctccatcctggcctccctctccaccttccagcagatgtggatcagcaaacag
gaatacgatgagtccggcccagccatcgtccatcgcaagtgcttctaa
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