Nematolebias whitei (Rio pearlfish): 119416930
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Entry
119416930 CDS
T08042
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119416930
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119416930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Arm_2
ARMC9_ARM
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
119416930
NCBI-ProteinID:
XP_037540057
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All DBs
Position
11:29452519..29465107
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AA seq
713 aa
AA seq
DB search
MMAPDPLRSATTVGGAEDTSLALPSDRSLSSGKQRVLEQVHSIKRTKSKHGQSSPLSPTS
PSPKNFTTYNEFGTYKLMASKGNDLVSRTNSTMSAGYNKLANYQKSRSQSARFPIRRNVS
SSSAWEQQINTTVGQKKPNGLTTSRSDPTLAPPRSPGTATMRLKGQNAFQVHQQSTSSMV
NGVYHSDSQTRINQPPSNQIQTDGRMSTIKMSKIEQTSAVNSAMSMSDNTLKEAVELLCS
TDENGQLYGANFIQHVTFNEESTKTEVYQLGGIPALVNLLDSSNLQISTAVAGALRNLVF
KNKTNKLEVHHCGGIAKALNLLKKTNSTETKKQITGLLWNLSSDDDLKRDLIDTAMPALT
ENVVVPFISSDDDMRCVDSNVFHNTTGCLRNLSSGSVKERNKMRNCSDLINSLMSYVGSC
AEKENPDEQSVENCVCILHNLTFQLEKECPEIFNQDFQSRASVSEEKKSAPVGCFSPRSS
KVPNKISLETLPESSADSSTSGVKWLCHPKAIDNYLLLLESSTNEPTREASCGALQNLTT
SKEGSGAVSQILLQKFKSFPILESLVKSENRTIQKTTLSLLDNMSRSRMQIDMARQMLPD
LITFLDSNTEEMVFCDEEAVSLCHTVLRLMLSDSEVTKKIIDKNKVSQLIKLSENKAASY
PKGSEAASVLLYNLWNDKNLHSTVKKMGLSKNHFISRKCEEASESLFSKIQTE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaccggacccgctgcgatccgccacgaccgtcgggggcgcggaggacacctcg
ctcgcgctgccgtctgacaggagcctgagctccgggaagcagcgcgtgctcgagcaggtt
cacagcattaagaggaccaagtccaaacacggccaaagcagcccgctgtctcctacaagc
ccatcacccaaaaatttcaccacctataatgagtttgggacgtacaagttgatggcgtct
aaaggaaatgacctcgtgagtcgcaccaactccaccatgtcggcaggctacaacaaactg
gcaaattaccagaagagtcgtagtcaatctgctagatttcccattagaagaaacgtcagc
tcgtcgagcgcatgggaacagcagatcaacaccactgtcggacaaaagaaacccaacgga
ctgacaaccagtcgcagtgatcctactttggcccctcctcgttctcccggaacagctacc
atgagactcaaagggcagaatgcttttcaagttcatcagcagagcacctcctccatggtt
aatggcgtataccactctgacagccaaacacgcatcaaccagccaccttctaaccaaatt
caaacggatggcaggatgagcacaatcaaaatgtccaaaatagagcagacgtcagcggta
aactctgcaatgagcatgtcggataatactcttaaagaagctgtggagttgctgtgttcc
actgacgaaaatggccagctgtatggagccaacttcatccagcacgtcaccttcaacgag
gagagcaccaaaacagaggtataccaactcggtggtattccagctctggtgaacctgttg
gacagctccaatttacagatcagcacagctgttgctggggctttgaggaatcttgttttt
aagaataagaccaacaagctggaagttcatcactgtggtggtatagccaaggccttgaat
ctactaaagaagactaattctactgagaccaagaagcaaatcactggtctgctgtggaac
ctgtcttctgatgatgacttgaaaagagatctaatagacactgctatgcctgctctgact
gaaaatgtggtagtgccattcatctcaagcgacgatgacatgagatgtgtagactccaat
gtcttccacaacactacaggctgcctgaggaacctgagcagtggcagtgtcaaagaaagg
aacaagatgagaaactgctccgacctcatcaactcactcatgagttacgttgggtcctgt
gccgaaaaagaaaaccctgacgagcagtctgtggagaactgcgtatgcattctccataat
ttgacctttcaactggagaaggagtgtccagagattttcaatcaggatttccaatccaga
gcatccgtaagtgaggagaagaaaagcgccccagttggctgcttcagcccgaggagcagc
aaggttccaaacaagatttctttggagacacttccagaaagcagtgctgactcatccaca
tcaggagtgaagtggctgtgtcatcccaaagccattgacaactacctgcttttgctggaa
tcatccactaacgaacccactcgagaggccagctgcggtgccctgcagaacctcaccacc
agcaaagaagggtctggtgccgtgagccaaattttgcttcagaagtttaaatcttttccc
atcttggagtctctggtgaaatcagaaaaccgcaccattcagaagaccaccttgtccttg
ctggacaacatgtcccgcagcagaatgcagatcgacatggcaaggcagatgttgccggac
ttgattaccttccttgactccaacacagaggaaatggtgttctgtgatgaagaagctgtg
tcactttgtcacacagtgctgagactgatgctgtcagacagtgaggtcacgaagaagatc
attgataaaaacaaggtttctcaactgataaaattaagcgaaaataaagcggcatcatat
cctaaagggagcgaagcagcctcagtgctgttgtacaacttgtggaatgacaagaatttg
cacagcactgtgaaaaagatgggattgtcaaaaaatcacttcatcagcagaaagtgtgag
gaagccagcgagtcattgttcagcaaaattcaaacagaatga
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