Nematolebias whitei (Rio pearlfish): 119418610
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Entry
119418610 CDS
T08042
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04217
Necroptosis
nwh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119418610 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119418610 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119418610 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119418610 (tnfaip3)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119418610 (tnfaip3)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C64
119418610 (tnfaip3)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
119418610 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
119418610
NCBI-ProteinID:
XP_037541861
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All DBs
Position
1:59162540..59171703
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AA seq
819 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAASGDLMHHLRGMHRHTLEMIAMNHF
PQAFREVVQAAILDRGMQASLEQEKKLNWCRELKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHKVLKETDTTVFKARFQAELLQSQEFTQTGLRYTTMNWEEEWDKIVKMAS
PVSSSNGLQFDSLEDIHIFILSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLQW
KPADCYKYPIVLGYDSQHFAPLITVKDSGPEIRAVPLINPKRVGFEELKVHFLMEKEHPQ
KERLLNDYLHIIEIPVIGLGHDTTWIMKAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGA
RIEGVVQTKGASVQGGLGVVGGSEAEVSSRGTRSSSPPCSSTGRGVVLSSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPVAGTVTTGLPGPNGAPTV
PHPAPGSGWTQWAGCETETERCSMCRQEAFRIFNGLCPPCMQRQQAPERSEPQQSNPRTE
GSAWSQARDTEQPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQTN
HHLTPPPAPVQSRHGLEAGFQNATRCRGSGCGSAGKAMLEGYCDKCYVKEQSSRLNQVAH
RTPYSPPLRDRAAKPRSSQQSQTQTQCRRSGCSNVSPGCTDLCPECHTRGQGREAGRRAQ
APKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcaaaacttcctccccaagttcctgttcgtctccaacctgctgaaagcc
gtgaagatccgtcagcgagtgcccaatgacgtggtgaagcctgccgccagcggtgacctc
atgcaccacctgcggggaatgcaccgccacacgctggagatgatcgccatgaaccacttc
ccccaggccttcagggaggtagtgcaggccgccatcctggaccgagggatgcaggcctcg
ttggaacaggagaagaagctcaactggtgtcgggagttgaagaagatggtgccacttcgc
accaatggagatgggaactgtctgcttcatgctgcgtctcagtacatgcttggtgttcag
gacacagacctggtgctccggaaagctctccacaaggttctgaaagagacggacactact
gtttttaaagctcgcttccaggcggagctgctgcagtcccaggagttcacgcagaccgga
ctccgatacaccaccatgaactgggaggaggagtgggataaaattgtaaagatggcatcg
ccggtctctagtagcaatggcctccagtttgactccctggaggatattcacatcttcatc
ctctccaacattctccgcaggcccatcatcgtcattgcagaccaggtggtcagaagtatg
aaatctggctcctccatctctcctcttaatgtgggtgggatttatctgcctttacaatgg
aagcccgcagattgctataaatacccaatagtgcttggctacgactcccagcatttcgca
cccctcatcaccgtcaaagacagtggtccagagatccgagcagttccactgattaaccca
aaacgagttggcttcgaggagctgaaggtgcacttcttaatggagaaggagcaccctcag
aaagagagacttcttaatgactacctgcacattatagagatccccgtcataggcttgggc
cacgacaccacatggatcatgaaagctgcacgactggatgagggcaacctgcctgaagac
atgaacctgatggaagactacctacagcttgtcaaccatgagtatcagcgctggcaggag
gacaaggagcaagcctgggccgcccagccgcagcgaccgccaccgttctctgtgtctcaa
ctctccctcattgagatccgttgtgccacgccccgatgcaccttctatgtctccgtggac
acgcagcctcattgccacgaatgctttgagaagcgacaggccaccaccggaggaggcgca
aggatagaaggggtggttcagaccaagggagcaagtgtacagggaggtttgggagtggtg
ggaggctcagaggctgaggtgagctccagagggactcgaagcagtagcccaccctgctct
tccactggtagaggggtggtcttgtccagtccccgctcggccccacccactgctcccagc
ctcagtctttacagtgaaactcatgccatgaagtgcaaaacaccgggctgcctctttacc
ctcagtgtggagcatgatggactttgtgagcgctgcttcaactccaggcagaatcacgga
ccccctgtagctggaacagttactacagggctccctggccccaacggggcacctactgtt
ccccacccagctccaggctctggctggacccagtgggcgggctgcgagacagagactgag
cgatgcagcatgtgcagacaggaggcgttcaggatattcaatggcctgtgtcctccatgc
atgcagagacaacaggctccagagaggagtgagccacagcagagcaaccccaggactgag
ggttctgcttggagccaggccagagacactgaacagccatgcctcacgctaaccccagga
cacacgtcggcctggcaggcccctctggcccggccatgtaaaagatctggctgccaattt
tttgggacaccagagaaactgggtttctgcactatttgctatgtagactatcagaccaac
caccacctgactcctcctcctgccccagtccagagcaggcatggtttggaggcaggcttc
cagaatgccacacggtgtcgtggatctggatgtggctcagctggcaaggcaatgctggag
ggctattgtgataagtgctacgtcaaagagcagagttcacgtctcaaccaagtggcacat
aggaccccttactccccccctttgcgtgaccgagcagctaaacccagatcttcgcaacaa
tcccagacccagactcagtgccggcgaagtggctgcagtaatgtgtccccgggttgcaca
gacctctgcccggagtgccacacgcgcggccagggacgagaagcaggcaggcgggcgcag
gcgcccaaagaaaagtctaagcagaggtgccggacacaaggctgcgaccactatgccaac
caggagaaacagggctactgcaacgagtgtgaccacttcaaacagatctatcgtggctga
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