Nematolebias whitei (Rio pearlfish): 119419490
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Entry
119419490 CDS
T08042
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a
KO
K16798
zinc finger protein GLI2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119419490 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119419490 (gli2a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
119419490 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
119419490
NCBI-ProteinID:
XP_037542751
LinkDB
All DBs
Position
13:6684000..6800553
Genome browser
AA seq
1491 aa
AA seq
DB search
MEASAPTATDKKECKGSGLDGSSFSELPKKPSPTTLSRGSHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGPPGLTGSPVISDISLIRLSPHAAVGTGESPFSPPHPYVSPHMEHYL
RSVHSSPTLSMISAARGLSPADVTHEHLKERALFSFPPPPPGANPSEYYHLMASASQRSP
YGDLLMQNGAAAAAAAAAAAHLPDYLGPVDVSRFSSPRLTPRLSRKRALSISPLSDASID
LQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPTFSFPHPINPVAYQHLLSQQR
GLNAFGHTPPLIQPTPSSFSARQHPLSASPMSAHNNSETSQSAGGDPAVSSTVNPLNTKK
SKVKTEAEGPLPISPSSQDHGGGVLDLSEDLDKDECKQEPEAVYETNCHWEGCSKEYDTQ
DQLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCS
KAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGC
TKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDAPPRLQPPKGNGENETNFKHGARGADGRM
EANSTSRGGQDCLQVKSIKTENSVTYQSSPGGQSSCSSEPSPLSNANNIDSGVEMAMHSG
GSFGDLSAPEECPVVDSTVPTGGQQAGVGLQLRKSTSYGGAVTIKLENIKKERLKTMRDS
CPWVNAGPPQGQRKTMKLPPIPAVGSLLDNSNMMGNLSGLHPGQPMGDLSSCEITLLNQL
NERRDSTTSTLSSACSRRSSGISPYYSSRRSSETSQFGANRHNNISSADSYDPISTDMSR
RSSEASHCGGGGFSGGGGPSLLSLTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRM
ALYSESQEGSSFLFHQPPSGIVPRRCSDLGYASQSMLPHEVPTNLPRRASDPVRRPTLDP
FSFPRVQRYNSMNNMNPMNAPFSAERYQTLAMQGYTRSDGSLQRYPFAPRPPSISENVAM
ENMAVDGMMSMGEQSGEDDMVLPDDVVQYLRSQNSGVSGPNLGNYNPNNQTQGYQTGMAP
SFHGQRRMAMVDASMAHSGQDMQSCQVGPNGSQQTFSASSNHMKKNMPVQWNEVSSGTMD
TTTKLPKQQQQQPLVRGNLAVIQQRHNFGSLQAQTQGLSSNQQVVPMSQNMSMQGYMNHS
NQRMVNISFQQHQQQRQNNGGNFNEQLSHQQGFSQEAGNTNIQPAHNGVANPELQSYRTR
VQMEGYAHMNQVDQQQNYSVPSKHQQHSVQNGTRGMLQPKPPTEPKSRQHMYCSVMQPSR
TPKMSDLSHGNDSSEASPKRNSSSENLNPAIIYTAQVHMFEPSAVGFDASMSPCPNEASK
NPTAANMASPGANQVSSSTADSSTGRSGGTEHAQIDFDTMLDDGDHSSLMSGTLSPGLLQ
SLSQSSSRLTTPRNSVTLASVPAGISNMAIGDMNSMLTALAEESKFLNMIS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttcagctccgaccgccaccgacaagaaggagtgcaaaggttctggtctggac
ggaagcagcttctctgaactccccaagaagccgtcgccgaccactctgagcagaggttcc
caccacctttttcccacttttcacacccccattcccattgacatgaggcaccatgagggg
cggtaccattatgagccacacccactccacgccatgcatgggcctccaggactgacagga
agtccagtcatctcagatatctctctgatccgactgtccccccacgcagcggtcgggacg
ggcgagtcaccgttcagccccccgcacccttacgtcagcccccacatggagcactacctc
cgctcggtgcacagcagccccaccctgtccatgatctcagctgcacgaggactgagccca
gctgacgtgacccacgagcatttaaaggagcgagccctgttcagtttcccccctccacct
ccgggagctaacccctccgagtattaccacctgatggccagcgccagccagaggagcccc
tacggagacctgctgatgcagaacggtgccgcggccgcagctgctgctgcggcagcagct
catctcccagattacctcggtcctgtggacgtctcccgcttctccagtccaaggctgacg
ccccggctgagcaggaagagggccttgtccatctcgccgctgtcagacgcaagcatcgac
ctgcagaccatgatccgcacctcgcccaactctctggtggcctacatcaacaactcccgc
tccagctcggccgccagcagctcctacggacacctgtcagtcggagggatcagccccacg
ttcagcttcccccaccccatcaaccccgtggcctatcagcatctgctgtcgcagcagaga
ggcctgaacgccttcggccacacgcctcctctgattcagccgacgccgtcctccttctct
gcccgccagcacccgctgagcgcgtcgcccatgtcggctcacaacaactccgagacgagc
cagagtgcaggcggagatccggctgtaagcagcaccgtcaatccattaaacaccaaaaag
tcgaaggtcaaaactgaagcggagggtccgctgcccatttctccatcctcacaggaccat
ggcgggggggtcctggacctgagtgaagatctggataaagacgagtgcaagcaggagccc
gaggccgtttatgaaaccaactgtcactgggagggctgctccaaggagtacgacacccag
gaccagctggtccatcacatcaacaacgaccacatccacggagagaagaaggagttcgtg
tgccgctgggacgagtgttcgcgggagcagaagcccttcaaggcccagtacatgctggtg
gtccacatgaggcgccacacgggggagaaaccgcacaaatgcacattcgagggctgctcc
aaagcttactctcgtctggagaatctcaagacccacctcaggtcccacaccggagagaaa
ccctacgtgtgcgagcacgaaggctgcaacaaggccttctccaacgcctcggaccgggcc
aagcaccagaaccgcacgcactccaacgagaaaccatacgtgtgtaaaatccccggctgc
acgaagcgctacacggacccgagctctctcaggaagcacgtgaagaccgtccacggaccc
gaagcccacgtcaccaaaaaacaacgaggcgacgccccgccgaggctgcagccgcccaaa
ggaaacggggagaacgagacaaacttcaagcacggcgcgagaggcgcagacggcaggatg
gaggccaacagcacctccagaggggggcaggactgtctgcaggtcaaatccatcaagact
gaaaactctgtgacgtatcagtccagtcctggtggccagtcgtcttgtagcagcgagccg
tcgcctctcagcaatgccaacaacatcgacagtggggtagagatggccatgcacagcggg
ggcagctttggggacctcagcgcaccagaagagtgccccgtggtcgactccaccgtcccc
accgggggtcaacaggcgggggtgggacttcagctgaggaaatccacaagttacggtgga
gcggtcaccatcaagttggagaacatcaagaaggagaggttgaagactatgagggactcc
tgcccctgggtgaacgctggaccaccgcagggtcaacgcaaaaccatgaagctgcctccc
attcctgcagtcggttccctgctggataactccaacatgatgggtaacttgagtggtttg
caccccggccaacccatgggggacctgtcttcatgtgaaataaccctgctgaaccagctg
aatgagcgccgcgacagcaccaccagcaccctcagttctgcttgcagtcggcgctcttct
ggtatatccccctactattccagccgccgctccagcgagacatcccagtttggagctaac
cgccacaacaacattagttcagccgactcctacgacccgatctccacggacatgtcccgc
cgctccagcgaggccagccactgtggaggaggtggttttagtgggggaggaggccctagt
ctcctcagtcttactccggctcagcattatcgtctcaaggcgaagtacgctgctgccact
ggcggagctccgcccactcctctcccaaacatggatcgaatgagcctaaggacacggatg
gctctttacagtgaatcccaggaaggctcctcattcctgttccaccagccaccctctgga
attgtgccaaggcgatgcagtgatcttggatatgcctcacagagcatgttgcctcatgaa
gttcccacaaatcttccacgccgggccagtgatccagtgcgtcgccccactctagaccct
ttttctttcccaagagttcaacgctacaacagcatgaacaacatgaaccctatgaatgcc
cctttttctgctgagcgctatcaaaccctggccatgcagggttacactcgctctgatgga
agcctccaacgttacccatttgctcctcgaccgccaagcatttctgagaacgtagccatg
gagaacatggcagtagatgggatgatgtctatgggggaacagagtggggaggatgatatg
gtgcttccagacgatgtggttcagtatctcaggtcacagaactctggagtgtcaggtcct
aacttgggcaactacaatcccaacaatcagactcaggggtaccagacaggcatggcccca
tccttccatggacagaggaggatggccatggtggatgccagcatggctcactctggtcag
gatatgcagtcttgtcaggttggtcccaatggatcgcagcagactttctcagcatcatcg
aaccacatgaagaagaacatgccggttcaatggaatgaggtgagctcagggacgatggat
acaacaacaaagctccccaagcagcagcagcagcagcctcttgtgaggggaaatctggct
gttattcagcagagacacaactttgggtcccttcaggcacaaactcagggcctgagcagc
aaccagcaggttgtgccgatgagtcagaacatgtctatgcagggatacatgaaccacagc
aaccagaggatggtgaacatctccttccaacagcatcagcaacagaggcaaaacaacggt
ggcaactttaatgaacaattgagtcatcagcaaggtttcagccaggaggctggaaacacc
aacatacaacctgcccacaatggtgtggcaaatccagaactacaaagctacagaacaagg
gtccagatggaaggttacgctcacatgaaccaggtggatcagcagcagaattacagtgtc
ccctccaaacatcagcagcatagtgttcaaaatggaaccagaggaatgttacaacccaag
ccgcccacagagcccaagtccagacaacacatgtattgtagcgtgatgcaaccaagccga
acccccaaaatgtctgatctgagccacggcaacgactcgtctgaggcaagcccaaagagg
aacagcagctcagagaatctgaaccctgccataatctacacagcccaggtccacatgttt
gaaccgtcagctgtgggctttgatgcttccatgtccccatgtcccaacgaggccagcaaa
aaccctactgcagccaacatggcctcaccaggagccaaccaagtctccagcagcacggcc
gactcctccaccggcagatcaggaggcactgagcacgcccagattgactttgacaccatg
ctcgatgatggagaccattccagcctcatgtcggggaccctaagtcccggtcttctgcag
agcctctcccagagctcatcacgcctcaccaccccacgtaactctgtcaccctggcttcg
gttcctgcagggatcagcaacatggccataggggacatgaactccatgctcacagctctg
gcggaagaaagcaagtttctcaacatgatcagctga
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integrated database retrieval system