KEGG   Nematolebias whitei (Rio pearlfish): 119422119
Entry
119422119         CDS       T08042                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03420  Nucleotide excision repair
nwh04110  Cell cycle
nwh04114  Oocyte meiosis
nwh04120  Ubiquitin mediated proteolysis
nwh04141  Protein processing in endoplasmic reticulum
nwh04310  Wnt signaling pathway
nwh04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119422119 (rbx1)
   04120 Ubiquitin mediated proteolysis
    119422119 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119422119 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119422119 (rbx1)
   04350 TGF-beta signaling pathway
    119422119 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119422119 (rbx1)
   04114 Oocyte meiosis
    119422119 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119422119 (rbx1)
   03400 DNA repair and recombination proteins [BR:nwh03400]
    119422119 (rbx1)
Enzymes [BR:nwh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     119422119 (rbx1)
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   119422119 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     119422119 (rbx1)
   Cul2 complex
     119422119 (rbx1)
   Cul3 complex
     119422119 (rbx1)
   Cul4 complex
     119422119 (rbx1)
   Cul7 complex
     119422119 (rbx1)
   Cul8 complex
     119422119 (rbx1)
   Cul9 complex
     119422119 (rbx1)
DNA repair and recombination proteins [BR:nwh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119422119 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119422119 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 119422119
NCBI-ProteinID: XP_037545397
LinkDB
Position
15:complement(21609112..21611017)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcgatggatgttgacacgccgagcggcactaacagcggggcgagcaagaag
cgttttgaagtcaagaagtggaacgcggttgcgctgtgggcctgggacatcgtggtggat
aactgtgccatctgtaggaaccacatcatggatctctgcatagagtgtcaggccaaccaa
gcttctgcaacatctgaagagtgcaccgtggcgtggggtgtctgcaaccacgcctttcac
ttccactgcatttcacgttggctgaaaaccagacaggtgtgtcccctggacaacagagag
tgggagtttcagaaatacggacactag

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