Nematolebias whitei (Rio pearlfish): 119422948
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Entry
119422948 CDS
T08042
Name
(RefSeq) platelet-derived growth factor subunit A-like
KO
K04359
platelet-derived growth factor subunit A
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04020
Calcium signaling pathway
nwh04510
Focal adhesion
nwh04518
Integrin signaling
nwh04540
Gap junction
nwh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119422948
04020 Calcium signaling pathway
119422948
09133 Signaling molecules and interaction
04518 Integrin signaling
119422948
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119422948
04540 Gap junction
119422948
09142 Cell motility
04810 Regulation of actin cytoskeleton
119422948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nwh04052
]
119422948
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119422948
Cytokines and neuropeptides [BR:
nwh04052
]
Cytokines
Growth factors (RTK binding)
119422948
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
119422948
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
119422948
NCBI-ProteinID:
XP_037546287
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Position
16:22402974..22429890
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AA seq
199 aa
AA seq
DB search
MKAAVYHLLAGFLCLSRTAAEESPLPQELLERLAHSHIRSISDLQRLLEIDSVENEVIEE
TKHDFPKDFSHSFPDHKKPQTHTRRKRSTVVEEALPAACKVRTIIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMRCQAARRNHRTVKVAKVEYVKRRPKLREVQVTLEDHLEC
ICTNKHHINQNSDTDNGIR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgcggtctaccacctcctcgctggattcttatgcctgtcacgcacagctgct
gaggagtctcctctcccccaggagctgctggagcggctcgcccacagccacatccgcagc
atcagtgacctccagcggctgctagaaatagactccgtagagaacgaggtgattgaggag
accaaacacgacttccccaaggacttctctcacagtttcccagaccacaagaagccacaa
acacacacaagacgaaagagaagcactgtggtcgaagaagccctgccagcagcgtgtaaa
gttcgcacgatcatttatgaaatccccaggagccaggtggatcccacttcagccaacttc
atcatctggcctccctgcgtggaggtgaaacgctgcaccggctgctgcaacacgagcaac
atgaggtgccaggcggctcgcagaaaccaccgtacggtcaaggtggcaaaagtggagtac
gtgaaacggcggcccaaattgagggaggtgcaggtgacgctggaggatcatttagagtgt
atatgcaccaacaaacatcacatcaaccaaaactctgacacagataatgggatcaggtga
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