KEGG   Nematolebias whitei (Rio pearlfish): 119423589
Entry
119423589         CDS       T08042                                 
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3
  KO
K05411  interferon regulatory factor 3
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04620  Toll-like receptor signaling pathway
nwh04621  NOD-like receptor signaling pathway
nwh04622  RIG-I-like receptor signaling pathway
nwh04623  Cytosolic DNA-sensing pathway
nwh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119423589 (irf3)
   04621 NOD-like receptor signaling pathway
    119423589 (irf3)
   04622 RIG-I-like receptor signaling pathway
    119423589 (irf3)
   04623 Cytosolic DNA-sensing pathway
    119423589 (irf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119423589 (irf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nwh03000]
    119423589 (irf3)
   04131 Membrane trafficking [BR:nwh04131]
    119423589 (irf3)
Transcription factors [BR:nwh03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    119423589 (irf3)
Membrane trafficking [BR:nwh04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    119423589 (irf3)
SSDB
Motif
Pfam: IRF IRF-3
Other DBs
NCBI-GeneID: 119423589
NCBI-ProteinID: XP_037546916
LinkDB
Position
17:24984711..24994214
AA seq 465 aa
MAHPKPLLIPWLRDQIDSGRYPGVQWTNPQHTQFSIPWKHALRQDSSDTDVLIFKAWAQV
SGNNQAQGDASIWKRNFRSALRVKGFKLVSDSKNDTANPHKVFRWPEEAGSEANSSAGSQ
EQNDAILFDGFNTQNTHVEPFLDDGLFIPQDVVIRAECPDGRDILQECLKTLNISPAAEG
TADFEFPSEQQQLQDQIVIGGHPLPGQQQDPVMFERAAGETGLPEQPACPMGGAVGGGYD
DGQYAEQFLQTVNKTRDGDSFKTYFRITVYYRGVKVSEQQVENEAGFRLVYRPELISPVW
DPETSLSLVSLPQPGGILDQTQATLTQKILDKLGHGLEVGVSGCVVYGQRWGETKAFWSF
SKFDRSGLQQEIPKLHPEPLYPFRDFIKGIIDFSNGGECPPCSLFFCLGEKWPDPEKRPL
EKKLISVEVSLTSMELLKNIAVAGGASSLQSVELQVSLEEMMELC
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctcatccaaaaccacttctgatcccgtggcttcgggatcagattgacagcggcagg
tatccaggtgtccagtggacaaacccgcagcacacgcagttctccatcccgtggaaacat
gctctgagacaggactcctcagacaccgatgttctcatctttaaggcctgggctcaagtg
agtggcaacaaccaggctcagggagatgcctcaatctggaagagaaacttccgcagcgcc
ctccgagttaaaggcttcaaactggtgtcagattccaagaacgatactgccaaccctcat
aaagtctttcgctggccggaggaggcaggatcagaggctaactcttctgctggatcccag
gagcagaatgatgcaattttgtttgatggctttaacacacaaaacactcacgttgagcca
ttccttgatgatggtctgttcattccacaagacgttgtgattcgagcagaatgcccagac
ggccgtgatattctccaggagtgtttaaaaaccctgaacatcagccctgcagcagagggc
acagcagacttcgagtttccatctgagcagcaacagctgcaggatcagattgtgattggt
ggacacccgttgcctgggcaacagcaggatccagtaatgtttgagcgtgcagccggagaa
actgggttgcctgagcaaccagcgtgtccgatggggggagctgtgggagggggctatgat
gacgggcagtacgcagaacagttcctccaaaccgtgaacaagaccagggatggagatagt
ttcaagacttatttcaggataacggtgtactacagaggggtaaaggtctctgagcagcag
gttgagaacgaagctggtttccgcctggtctacaggcctgaactcatcagtccagtttgg
gatcctgagacgagcctttccttggtctccctgccacaacctggaggcattctggatcaa
actcaagctacgctgacccagaagattctggacaagttgggacacgggctcgaagtgggg
gtctcaggctgtgtggtgtatggccagcgatggggtgaaaccaaagctttctggagcttc
tccaagtttgacagaagcggactgcagcaagagattcctaagctgcatccagaaccactg
tacccgttcagggactttatcaaaggaataattgatttcagtaatggaggcgaatgccct
ccttgctccctgttcttctgtctcggggagaagtggcccgacccagagaagagaccgctg
gagaaaaaactcatctcagttgaggtgtctttaacttctatggagttgctgaagaacata
gctgttgcaggtggcgcctcctctctgcagtctgtagaactgcaggtgtctcttgaagaa
atgatggagctgtgctga

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