Nematolebias whitei (Rio pearlfish): 119423589
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Entry
119423589 CDS
T08042
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04620
Toll-like receptor signaling pathway
nwh04621
NOD-like receptor signaling pathway
nwh04622
RIG-I-like receptor signaling pathway
nwh04623
Cytosolic DNA-sensing pathway
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119423589 (irf3)
04621 NOD-like receptor signaling pathway
119423589 (irf3)
04622 RIG-I-like receptor signaling pathway
119423589 (irf3)
04623 Cytosolic DNA-sensing pathway
119423589 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119423589 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119423589 (irf3)
04131 Membrane trafficking [BR:
nwh04131
]
119423589 (irf3)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119423589 (irf3)
Membrane trafficking [BR:
nwh04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119423589 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
119423589
NCBI-ProteinID:
XP_037546916
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All DBs
Position
17:24984711..24994214
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AA seq
465 aa
AA seq
DB search
MAHPKPLLIPWLRDQIDSGRYPGVQWTNPQHTQFSIPWKHALRQDSSDTDVLIFKAWAQV
SGNNQAQGDASIWKRNFRSALRVKGFKLVSDSKNDTANPHKVFRWPEEAGSEANSSAGSQ
EQNDAILFDGFNTQNTHVEPFLDDGLFIPQDVVIRAECPDGRDILQECLKTLNISPAAEG
TADFEFPSEQQQLQDQIVIGGHPLPGQQQDPVMFERAAGETGLPEQPACPMGGAVGGGYD
DGQYAEQFLQTVNKTRDGDSFKTYFRITVYYRGVKVSEQQVENEAGFRLVYRPELISPVW
DPETSLSLVSLPQPGGILDQTQATLTQKILDKLGHGLEVGVSGCVVYGQRWGETKAFWSF
SKFDRSGLQQEIPKLHPEPLYPFRDFIKGIIDFSNGGECPPCSLFFCLGEKWPDPEKRPL
EKKLISVEVSLTSMELLKNIAVAGGASSLQSVELQVSLEEMMELC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctcatccaaaaccacttctgatcccgtggcttcgggatcagattgacagcggcagg
tatccaggtgtccagtggacaaacccgcagcacacgcagttctccatcccgtggaaacat
gctctgagacaggactcctcagacaccgatgttctcatctttaaggcctgggctcaagtg
agtggcaacaaccaggctcagggagatgcctcaatctggaagagaaacttccgcagcgcc
ctccgagttaaaggcttcaaactggtgtcagattccaagaacgatactgccaaccctcat
aaagtctttcgctggccggaggaggcaggatcagaggctaactcttctgctggatcccag
gagcagaatgatgcaattttgtttgatggctttaacacacaaaacactcacgttgagcca
ttccttgatgatggtctgttcattccacaagacgttgtgattcgagcagaatgcccagac
ggccgtgatattctccaggagtgtttaaaaaccctgaacatcagccctgcagcagagggc
acagcagacttcgagtttccatctgagcagcaacagctgcaggatcagattgtgattggt
ggacacccgttgcctgggcaacagcaggatccagtaatgtttgagcgtgcagccggagaa
actgggttgcctgagcaaccagcgtgtccgatggggggagctgtgggagggggctatgat
gacgggcagtacgcagaacagttcctccaaaccgtgaacaagaccagggatggagatagt
ttcaagacttatttcaggataacggtgtactacagaggggtaaaggtctctgagcagcag
gttgagaacgaagctggtttccgcctggtctacaggcctgaactcatcagtccagtttgg
gatcctgagacgagcctttccttggtctccctgccacaacctggaggcattctggatcaa
actcaagctacgctgacccagaagattctggacaagttgggacacgggctcgaagtgggg
gtctcaggctgtgtggtgtatggccagcgatggggtgaaaccaaagctttctggagcttc
tccaagtttgacagaagcggactgcagcaagagattcctaagctgcatccagaaccactg
tacccgttcagggactttatcaaaggaataattgatttcagtaatggaggcgaatgccct
ccttgctccctgttcttctgtctcggggagaagtggcccgacccagagaagagaccgctg
gagaaaaaactcatctcagttgaggtgtctttaacttctatggagttgctgaagaacata
gctgttgcaggtggcgcctcctctctgcagtctgtagaactgcaggtgtctcttgaagaa
atgatggagctgtgctga
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