Nematolebias whitei (Rio pearlfish): 119423737
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Entry
119423737 CDS
T08042
Symbol
rfng
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00514
Other types of O-glycan biosynthesis
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119423737 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119423737 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nwh01003
]
119423737 (rfng)
Enzymes [BR:
nwh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
119423737 (rfng)
Glycosyltransferases [BR:
nwh01003
]
Glycan extension
O-Glycan
119423737 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
119423737
NCBI-ProteinID:
XP_037547074
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All DBs
Position
17:3409927..3422801
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AA seq
398 aa
AA seq
DB search
MNTASVAFSKSCFVFFLGLCSLLLLLIPAFQPPARLVDLPQPRPQVRPAPVHHAEVPGGS
VSADGAYSDSGLVEALRTPVLTKDFRNEILDLQSGKDTRSPGRLVDSSSRSRPPDHLELK
DIFIAVKTTKKYHKSRLELLIQTWVSRAKEQVRIYLFPSXNWTVLKLCCCLISLTGAHII
NTNCSAAHNRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLDLLSSYHHSQDIY
LGRPSLNHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEK
IRLPDDCTIGYIIEALLEVKLTHTSLFHSHLESLQKLPADTLLDQVTLSYGGFENRGNVV
GIGKSFSLAEDPTRFKSVHCRLYPDTEWCSKSRPGHKN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcttcagtggctttcagtaagtcctgctttgtgttcttcctgggattgtgc
tccctcctcctcctgctcatcccagctttccagcctccggcccggcttgtagacctgcct
caaccccgaccccaggtcagaccggccccagtgcaccatgctgaggttccaggaggttct
gtcagcgctgacggtgcatattcagactctgggctcgtagaagctctaagaacacccgtt
ctaaccaaagacttcaggaatgaaatccttgatctccaaagtggtaaagacacgagaagt
cctggaagacttgtggactcaagttcacggtccaggcctccagaccacttagaactgaag
gacatttttattgcggtgaagaccaccaaaaagtaccacaagtccagactggagctgctg
atccaaacctgggtgtcccgagctaaagagcaggtgaggatttatctgttcccctcgtaa
aactggactgttcttaaactgtgctgttgtctgatttctcttacaggagctcatatcatc
aacactaactgctcggcagctcacaaccgacaggctctgtgctgcaagatgtctgttgaa
tatgacaaattcatcgagtcccagaagaagtggttctgccacgtggatgatgacaactat
gtgatcctgcccagtctgctggatctactttcttcctaccatcacagccaagacatctac
ctgggccggcccagtctgaaccaccccatagaggctgcagagagggtcaagagtgacggc
tcagtttccgtcaagttctggtttgccacaggaggagcaggtttctgtattagccgaggc
ctggctctgaaaatgagcccttgggccagtttggggaacttcatcagcacggcagaaaag
atccgcctccctgacgactgcaccatcggctacatcatcgaggccctgctggaggtcaag
ctgactcacaccagcttgttccactctcacctggagagcctccagaagctacccgccgac
actttgcttgatcaggtgactctcagttatggaggctttgagaacagagggaacgtggtc
ggcatcggtaaaagcttttcactggctgaagaccccacaaggtttaagtcagtccactgc
cgtctgtatccagatactgagtggtgctcaaaaagtcgacctggacacaaaaactga
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