Nematolebias whitei (Rio pearlfish): 119423970
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Entry
119423970 CDS
T08042
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119423970
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119423970
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
119423970
NCBI-ProteinID:
XP_037547333
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Position
17:25017050..25050757
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AA seq
1235 aa
AA seq
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MTEASEKDQSWIPKVFKKRECTTFVEDSFSNGALCQCGKAKDAHSSVALGDFFSTAMVNH
WDSAQHSSEYPTDAFGEVQFAGASKRHSYFLRLSWDSSPSMVYTMMTTHWNLPAPNLVVS
VVGGESRTKVKTWVREVLRKGLVKASQRAAAWILTAGLREGVGRCVGEAVRDHATAASSD
SINRVVALGVASWGLVHNREQLVNPKGCFPAKYYVQNSSRDSCSLDNNYQAFLLVDDGSV
GRRGGETTFRAKLEDFISHQRTGIWGSGSIDIPVLCMLISGETSMLERVDVSLKNSIPLL
VLAGSGGIADFLSDLLENLSSAPVFQSSNEGDSEASPSVDLKEKVTERVKNLFSAEPDTD
KLVKQALSIYQNKHFITIYHGEQESPTDFDTVLLKALVGASKYCVSVEASPYKEELNLAV
AWNRVDIAKSELFNGDIQWRYEDLEGSMTDVLINDKPQFVRLFTENGLNILDYLTYGRLE
QLYGSVAEGTQLYQLLQRRLAMRVGTTPMPTSHPPESLPETHSKLLTEKAQSETQSEITL
FEVSGVLEILMGDVCELFYYDVLGLQNVSSQRIAPRRVSKLLRGERMYQTRRCSSPWASL
FIWAVLQNRSEMATFFWEMAGESVLSALSGCKILRQLSKLEDENETKLSMKELAQKFENL
ALDIFSSCYRSDESRSFKLLIRKSPVWGGTTCLQMGMSADARLFFSHDGVQSLLSQIWWG
DMERNTEVWKLLLTFFCPFICYTNLISFREQYKQQQEEENHNEDRPSNIHYGTTVFSFAD
IKHVISSGLLFNAGIPEPYRPPQRPFIVSRWRQFWFAPVTAFLGNVLMYFLFLGFFAYVL
LLDFKPPPPSGPAITECMLYFWVFTIVCEEMRQTFFFGLLPWHQRLRVYIQDMWNKWYLT
AIMLFIIGSVCRMFKSSHEIGRDVLCVDYMIFTLRLIHIFIIHKRLGPKIIIIGKMMKDV
FFFLFFLGVWIVAYGVANQGLLYSYDSNFSRILRRVLYRPYLHIFGENFVDEVDVGKEWA
VTCTDNITLIEEGAEPCRSLNNNWLVIILLVIYLLVTNILLINLLIAMFSYTFTEVQANS
DIYWKFQRYNLIVQYHSRPSLAPPFIILSHINLFIKRIIRKVPSVKVHHFVLQLSGKEAN
TLMTWETIQKEDFLTAQNKIQKSSDTEKLKQMSDKLDSVLKHLAKIRDFDHRLKALENQM
EHTSMQRRTSKPPGPPPTSRGSFHHLENQNKPLLS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcaagtgagaaggatcagagttggatccccaaggtcttcaagaaaagggag
tgcaccacctttgtggaagattctttcagtaatggagctctgtgtcagtgtggaaaagca
aaagatgcccacagttctgtggctctcggggactttttcagcacagccatggtgaaccac
tgggacagcgcccagcactcgtctgaatacccgactgacgccttcggagaggtgcagttt
gcaggagccagcaagagacacagctatttcttgcgtctgtcatgggactcctctccgtct
atggtctacaccatgatgacgacccactggaatctccctgcacccaatctggtggtttct
gttgtgggaggagaaagcaggacaaaggtgaagacctgggtgcgggaggtgctcaggaag
ggacttgtgaaagcttctcaaagagcagcagcgtggatcctgactgcaggattgcgtgaa
ggtgttggtaggtgtgtcggcgaggcggtgagagatcacgccactgcagcttcttcagac
tccatcaacagagtggtggcactgggcgtcgcttcatggggtttggtgcataacagagag
caacttgtcaatccgaagggctgttttcctgctaaatactacgtgcagaactcatctcga
gattcctgcagcctggataacaactaccaggccttcctgctggtggatgatgggagtgtg
ggccgcagaggaggggagacgaccttcagagccaaactggaggacttcatctcccatcag
cgcacaggaatatggggtagcggcagcattgacattcctgtcctttgcatgctgatatcc
ggggagacgagcatgttggagagagtggatgtttctctgaaaaactccattcccttgttg
gtcctggccggttcaggaggcattgcagacttcctgagtgacctcttggagaatctgtct
tcagccccagtcttccagtcttctaatgagggggacagcgaggccagtcctagtgtggat
ctgaaagaaaaagtgacggaacgagtgaagaatttgttttctgctgaaccagacacagac
aaacttgttaaacaggctctcagcatttaccaaaacaagcattttataacaatctaccat
ggagaacaggagagcccgactgattttgatacagttctgctgaaagcattagtaggagca
agtaagtattgtgtctcagttgaggcttccccttacaaggaagagctcaacctagctgtt
gcttggaacagagtggacattgctaagagtgaactctttaatggagacatccagtggagg
tatgaggacttggaagggtccatgacagatgtcctgatcaacgacaagcctcagtttgtt
cgtcttttcactgagaacggcctgaacatcctggactacctgacttatggacgactggaa
cagctctatggctctgtggctgagggcacacagttataccagctacttcagcgccgctta
gccatgagagttggaactacacctatgcctacatcacatccaccagagagtttaccagag
acacattctaaattattaacagagaaagctcagagtgaaacacagtctgagatcaccctt
tttgaggtttcaggagtcctggaaatattaatgggtgatgtttgtgagctgttctactat
gacgttttgggcttacaaaatgtctcatcccaaaggatagctccaaggcgtgtaagtaag
ctgctgcgtggagagcgcatgtatcaaacaaggcggtgctcctccccctgggcttcactt
ttcatctgggctgttctacagaaccgcagtgagatggccactttcttctgggagatggca
ggagagtcagtgctgagcgctctaagtggttgtaagatcctgagacaactgtccaaactg
gaagatgaaaatgaaaccaaactctccatgaaagaattggcccagaagtttgaaaatctg
gcactggatatcttcagctcttgttatcgcagcgatgaaagtcgctccttcaagctgctg
attaggaaatctcctgtttggggtgggaccacatgcctacagatgggcatgagcgctgat
gcccgacttttcttcagccatgatggagtgcagtccctgttgtcccaaatctggtggggt
gacatggagaggaacacagaggtgtggaaacttctgctcactttcttctgccctttcatt
tgctacaccaacctcatctccttcagggagcaatacaaacagcaacaagaggaggagaat
cataacgaagacagaccatctaacattcattatgggacaaccgtcttctctttcgctgac
atcaagcacgtcatttcatctggtctcctttttaacgcaggcatacctgaaccctacaga
ccaccacaacgtccgttcatagtgtcacgctggcgtcagttctggtttgcacctgtcact
gcttttttgggaaacgtcctgatgtactttctgttcctcggattttttgcgtacgtgctg
ttgctggacttcaagccaccaccgccctctggtccagccatcacagagtgcatgctgtac
ttctgggtgttcaccattgtgtgtgaggaaatgagacagacttttttcttcggtttatta
ccttggcatcaaaggctcagagtctacattcaggatatgtggaataaatggtacctcact
gccataatgctgttcattattggatcagtctgcaggatgtttaagagttcacatgagatt
ggacgggatgtcctgtgtgtggactacatgatcttcactcttcgcctgattcacattttt
atcattcacaaacggctgggtccaaaaattatcattattggcaaaatgatgaaggatgtc
ttcttcttcctcttcttcctgggagtatggattgtggcatatggagtagccaaccagggt
ttgctttactcctatgactcaaacttcagtcgcatcctgcgcagagttctctacagacct
tacttacacatctttggagagaattttgtggatgaggtagatgttggaaaggagtgggct
gtaacctgcacagacaatataacgttgattgaggagggtgcagagccatgcaggtctctg
aacaacaactggcttgtgatcattctgttggttatttatcttctggttacgaacatccta
ctcatcaacctgctcattgccatgtttagctacaccttcactgaagtgcaggctaacagt
gacatctactggaagttccagcgctacaacctcattgtccagtatcactccaggccctca
ctggctcctcccttcatcatcctctctcacatcaacttatttatcaagaggatcatccgc
aaggttccctctgtcaaggtccaccactttgtcttgcagttgagcgggaaagaagcgaac
acattaatgacgtgggaaaccatccagaaagaggacttcctgactgctcaaaacaaaatc
cagaaaagcagtgacactgagaaactcaaacagatgtctgacaaattggatagcgttctt
aaacacttggctaaaatcagagattttgaccacaggcttaaagctctggagaatcagatg
gagcacaccagcatgcagaggcgaacatctaaacctcctggaccaccacctacatcaaga
ggtagtttccatcatttggaaaatcagaacaaaccacttttaagttaa
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