Nematolebias whitei (Rio pearlfish): 119426533
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Entry
119426533 CDS
T08042
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04020
Calcium signaling pathway
nwh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119426533 (flt1)
04020 Calcium signaling pathway
119426533 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119426533 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nwh01001
]
119426533 (flt1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119426533 (flt1)
Protein kinases [BR:
nwh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
119426533 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
C2-set_2
C1-set
Ig_4
Ig_5
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
119426533
NCBI-ProteinID:
XP_037550025
LinkDB
All DBs
Position
20:complement(29874140..29909093)
Genome browser
AA seq
1266 aa
AA seq
DB search
MKIFALVCLIFGLYGVFGKEKDKGKFNVPVLDVTSRQLVLEVNQTLLLNCSGRWELSWAF
PAGVDRSKLDVSESRCGRTSHRYCSQLLVSHSQAQHTGPYRCRYKHRPTKQSSVYVFVTD
SRQPFVEHEGMSPDVLYMKVNEPLVIPCRVTHPNITTTLVKQYHQVLSPDRKNIIWDSKK
GFIIKTPNLSYVGLVYCQTVIEGVKRSRSYIVYRPVSNITEVYLNTSGPVQKLKGERLVL
NCTATAELNTRVKITWDYPGKSISAGSSSRRLVRHPMHMLFYSILTIPKLQHSHQGLYTC
RVTSGEKRKQQQVSVMVYDRPFIRLKPRNGSVLLVQAGQKSYKISPKLRAFPAPEVIWWK
DNMVATNQCSRYHMDGTSLVIRDVAEEDAGEYTVHVHIQQHGLYQNLTFTLVVNVSPQIG
EKAVSSQNPVSVPRGSRKKLHCTSHGVPPPHIQWLWHRCPPKGLCVCPTSSSLWSPVNES
LSASSAYNPILSVTHAQEVLQGKKKTVGVLTVAEALVSGVYRCIASNSLDTDQLDIPFYV
TDVPGGFSVNQLEEAREGGDLHITCSANKYLYTELSWRGVNITEESLITGLNIYQPPVGE
FSTSLILLLSNLTSRDSVVYRCSARHVITGQEAHLDTQVVVTILEPPVLLSNLTDCTVNA
SSSVTLSCPSQGVPPPTIKWYKDERPLRQGSGIVISAGDGSLHIDRITVEDRGLYTCLAI
NERGSAESSAYIWVNSVSEASFLEIPTITCTCVVATLFWLLLTLFIRKLKQSNVSNSKPE
YLSIILDAGDGPIEEQCERLQYDPNQWEFPRERLKLGKLLGRGAFGKVMQAAAFGISNCS
SCRTVAVKMLKEGATASEHKALMTELKILNHIGNHLNVVNLLGACTKPGGPLMIIVEYCC
FGNLSTFLKNKRDVYSHKRAEGGTNEGPSCVSSIKTGLNEKDLDLDPKCSTKSPLFLEDL
ISFSFQVARGMEFLASRKCIHRDLAARNILLTDNKVVKICDFGLARDIYKDPDYVRKGDA
RLPLKWMSPESIFDKVFTTQSDVWSYGILLWEIFSLGASPYPGLHIDEEFCHRLKNGTRM
RAPEYSTPEIYSTMLACWEASPSDRPTFTNLVETLGDLLQARVQQEGKDYIPLGSFRNAD
GSQSEAFKENPLAVTNLSYMRGMATLQTFDELTCEEGGSPDDEQSDSGMVLPSEELDQMM
RNNTQNKKLSRFFIFSKCRDNPAPFLRSDITDLHDDKPSMLPCDWECDEGGSPPPDYNSA
FFYPSL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgccctcgtttgcctgatttttggattgtacggcgttttcggaaaagaa
aaggacaaagggaagttcaacgtccctgtcctggacgtgacgagtcgtcagctggtcctg
gaggtcaaccagacactgctgctcaactgcagtggtcgctgggagctgtcctgggcgttc
cccgcgggcgtggacaggtcgaagttggacgtgtctgaatcacgctgtgggaggacgagc
caccgttactgcagccagctgcttgtgagccacagccaggcccaacacaccggcccgtac
cgctgccggtacaaacacaggcccacgaaacagagctccgtctatgtgtttgtcacagac
agccggcagccatttgtagaacatgagggtatgagtccagatgtgttgtacatgaaggtg
aacgagccactggtcatcccctgcagggtcacccaccccaacatcaccaccacactggtc
aagcaataccaccaagttctgtctccagaccggaagaacatcatttgggacagcaagaaa
ggtttcatcatcaaaactcccaacctctcctacgtcggcctcgtttactgccagaccgtc
atagagggcgtcaaacgttctcgttcgtacatcgtgtacagaccagtgagcaacatcact
gaggtctacctgaacaccagtgggcctgtgcagaagctgaagggggagaggctggtcctg
aactgcacggccacggcggagctgaacaccagagtcaaaatcacctgggactaccctgga
aagagtatcagcgctggctccagctcgagacggctggtgagacacccgatgcacatgctg
ttctacagcatcctgaccatcccaaagctgcagcattcacaccaaggcctctacacctgc
cgcgtcaccagcggtgagaaacgtaaacagcagcaagtctcagtgatggtttacgatcgt
ccgtttatccgactgaagcccagaaatggatcggtgctgttggtccaagcgggacagaaa
tcctacaaaatctctcccaaactgcgagcattccctgcccctgaagttatctggtggaag
gacaacatggttgcaacaaaccagtgctccagatatcacatggatggaacttctctcgtg
attcgagatgttgcagaggaggatgctggagagtacactgtccatgtgcacatccagcaa
catggactctaccagaacctcacattcacacttgtagttaatgtgagccctcagattggg
gagaaagcagtgtcgtcgcagaaccccgtctccgtgcctcgagggagcagaaaaaagctt
cactgcacatcccacggcgtccctccacctcacattcagtggctctggcaccgctgcccg
cctaaaggcctgtgtgtatgtccgacatcctcctccctgtggagccccgtgaacgagagt
ctctcggcttcatctgcatacaaccccatcctgagtgttacacacgcacaggaagtgctt
caggggaagaagaagactgtgggggttctgactgttgcagaggctttagtgtctggagtt
tatcgttgcatcgcctccaactctttagacacagatcaactagacatccccttctacgtc
acagatgttcctggaggctttagtgtaaaccagctggaggaggccagagagggcggagac
ctccatatcacctgttcggcaaataaatacttgtatacagagctgtcgtggcgaggagta
aacatcacagaggaatcccttatcactggcttaaatatttatcagccccccgtgggggag
ttttccacctctctgatcttgttgctaagcaacctgacttccagagactctgtagtgtac
agatgctcagcgcgccacgtcatcaccgggcaggaagcacacctggacacgcaggtggtg
gtcacaattcttgagcctcctgtgctgcttagtaacctgacagactgcactgtcaacgcc
agcagctcggtgaccctgagctgtccctctcaaggggtcccgcctccaaccatcaagtgg
tataaagatgagcgccccctacgccagggatcaggtatcgtcatatcagcaggagatggg
agcctccatattgacagaatcacagtggaggaccggggtctgtatacttgtctggccatc
aatgagagggggtctgcagagagctctgcctacatatgggtcaacagtgtgtctgaagct
tcgtttttggaaattcccactataacctgtacctgtgtggtggccactctcttctggctc
ttactcactctgttcattcgtaaactgaagcagtccaacgtttcaaactccaaaccagaa
tacctgtcaatcatactggacgcaggagacgggccgatagaggagcagtgtgagcggctg
cagtatgaccccaaccagtgggagttccccagggagcgcctgaaattagggaagcttctc
ggtcgtggagctttcggtaaagtgatgcaggcggctgcgtttgggatcagcaactgctcc
agctgcaggactgtagctgtgaagatgctcaaagagggagccacagccagcgaacacaag
gctctgatgaccgaactgaaaatcctcaaccacattgggaaccatctgaatgtggtcaac
ctcctgggagcctgcaccaagccaggaggaccactgatgatcattgttgagtactgttgc
tttggaaacctttcaactttcttaaagaataaaagagatgtttattcacataaacgggca
gaaggaggaacaaacgaagggccgagttgtgtcagcagcatcaaaacagggcttaatgaa
aaagaccttgaccttgatcctaaatgttctaccaaatccccactgttcctggaggatctg
atttccttcagctttcaagtggcacgtgggatggagttcctggcatctcgcaagtgtatt
cacagagatctggctgcaaggaacattttactgactgacaacaaggtggtgaagatctgc
gacttcggcctggccagagacatctacaaagacccagactacgtccgcaaaggagacgcc
cgtctccctctgaagtggatgtctcccgagtccatctttgacaaggtgttcaccacccag
agtgacgtttggtcctacggcatcctgctgtgggagatcttttctttgggagcctctcca
taccccggccttcacatcgacgaggagttttgccaccgattgaaaaacggaaccaggatg
cgagcgccagagtacagcacgcctgaaatttacagcacgatgctggcatgctgggaggcg
agtccttcggaccgacccactttcaccaacctggtggagacactgggagacctgctacag
gcgagggtgcagcaggaggggaaggattatattcctctgggctcgttcaggaacgcagac
gggagtcaaagcgaggccttcaaagaaaacccgctcgcagtcacaaacctgagctacatg
aggggtatggccacgcttcagacgtttgacgagctgacctgcgaggagggaggcagcccc
gatgacgagcagagcgacagtgggatggttcttccctccgaggagctggaccaaatgatg
agaaataacacccagaacaaaaaactcagcagattttttattttttccaagtgtcgagac
aacccggcgccctttttgcgcagtgacatcaccgatctccatgacgacaagccctcgatg
ctgccgtgcgactgggagtgcgacgaaggcggatctcctcctcccgactacaactctgcc
ttcttctacccgtccctttag
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