Nematolebias whitei (Rio pearlfish): 119427220
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Entry
119427220 CDS
T08042
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04620
Toll-like receptor signaling pathway
nwh04621
NOD-like receptor signaling pathway
nwh04622
RIG-I-like receptor signaling pathway
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119427220 (traf3)
04621 NOD-like receptor signaling pathway
119427220 (traf3)
04622 RIG-I-like receptor signaling pathway
119427220 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119427220 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-TRAF_2
zf-rbx1
ATG16
RING_XB3-XBAT31
zf-RING_6
Crescentin
CCDC113_CCDC96_CC
GAS
MctB
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119427220
NCBI-ProteinID:
XP_037550728
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All DBs
Position
21:complement(29302171..29309979)
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AA seq
537 aa
AA seq
DB search
GFLPLHGGFRDHFVETPEAKYRCEDCRLVLCHPRQTECGHRFCQSCINDFLSRPNPICPA
DKEPLFKDKIFKDVCCHREIMALKVFCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLG
KCKERMMRKEIPDHLTWKCKHRETTCEFCMTKMPLTDLQKHKDTVCPKFPVSCPNHCSSS
SLPRSELSSHQHDCPKAQVSCLFHRFGCTFKGLNQEMRQHDSAFAAEHLRMMVNRNCLLE
NKVEDVKEELMERYKVLPSLSSRLSELENQNDELRDKNRLMEQKLATMQKLMSSHSEKLL
ELELEIRSLRLLRDEVENLRGALENVRTRLGALEQGGRCGTGSTHTLASLETQLTQHDDM
LSVHEVRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFG
YKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDA
FKPDPNSSSFRRPGAEMNIASGCPLFVSQSLLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gggttcctgcctcttcacggaggattcagagatcactttgtcgagacgccagaggccaag
taccgctgtgaggactgcaggctggtcctgtgccatcctcgccagacggagtgtggacac
cgcttctgtcagagctgcatcaacgacttcctcagtcgtccgaacccgatctgtccggcc
gacaaggagcctttgttcaaagacaagatctttaaagatgtttgttgtcatcgagagatc
atggcgctgaaggttttctgtcgaagcgaagctaacggctgtcaggagcagatgagtctg
cagcagataccagaccacctgaatgtgtgtccgttcttcgaggttccctgtcctttgggt
aaatgtaaggagcgaatgatgaggaaggagattcccgatcacctgacatggaaatgtaaa
cacagagagaccacttgtgaattctgcatgaccaagatgcctttgaccgacctgcagaaa
cacaaagacaccgtgtgtccaaagttcccagtgtcatgtcccaaccactgctcctcttcc
tccctgccccggagtgagctttccagccaccagcacgactgccccaaagcccaggtcagc
tgtctgtttcatcgcttcggctgtacttttaagggtttgaaccaggaaatgaggcaacac
gactcagccttcgcggcagagcatctacggatgatggtcaacaggaactgcttgttagaa
aacaaggtggaggacgtcaaagaggagttgatggagcggtataaggttcttccatctctg
agcagccgcctgtcggagctcgagaaccagaacgacgaactccgagacaagaaccggctt
atggagcagaaactggccaccatgcagaaactgatgagctctcactcagagaagctgctg
gagctggagctggagattcgttccctccgtctccttcgggacgaagtggagaacctgcga
ggagcgctggaaaacgtccggacgaggctaggcgccctggaacaagggggacggtgtgga
accgggtcgactcacactctggcgtccctggaaactcagctgactcagcacgacgacatg
ctgagcgtccacgaggtccggctggctgacatggacttgcgctttcaggtgctggagacg
gcgagctacaacgggactctgatctggaagatccgagactacaagaggcggaaacaggag
gcggtggcaggaaagacgttgtctctttactcccagccgttttatactggatactttggg
tacaagatgtgcgctcgggtttacttaaacggagacgggatgggcaaggggacgcacctg
tctctgttcttcgtggtgatgagaggggagtacgacgctctgctgccgtggccgttcaaa
cagaaggtgactctgatgctgatggaccagggtccttccaggaaacacctgggtgatgcc
tttaagcccgacccgaacagcagcagcttcagacgtcccggggcagagatgaacatcgcc
tccggctgtcctctgttcgtgtctcagagtctcctggagacgggcagctacatcaaagat
gataccatcttcatcaaggtcacagtggatacgtctgacctccccgacccgtga
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