KEGG   Nematolebias whitei (Rio pearlfish): 119428301
Entry
119428301         CDS       T08042                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04115  p53 signaling pathway
nwh04210  Apoptosis
nwh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119428301 (apaf1)
   04115 p53 signaling pathway
    119428301 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119428301 (apaf1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz APAF1_C Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WHD_APAF1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta NB-ARC Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR75_1st CARD Beta-prop_IFT140_1st WDR90_beta-prop_4th DSE1_N NBCH_WD40 CFAP251_N Beta-prop_RIG_2nd Beta-prop_Aladin RMC1_N Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_HPS5 ASA1 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Ge1_WD40 CARD_2 WDR54 AAA_16 PAC11 AAA_22 LRRCT_2 WD40_like AAA_18
Other DBs
NCBI-GeneID: 119428301
NCBI-ProteinID: XP_037551896
LinkDB
Position
22:14949614..15011441
AA seq 1296 aa
MVMEERARSCLLRLRHKLEEDIKPTYLMDHMISDGVMTVEEEEKIKTQSTRKNQAAALLD
LLLRKDNRSYISFYNALVKEAYDDLANLLRADLPCVSYGDQNGSSDHHTPYVQTMLSEGG
VPQRPVVFVSRPELINRVREKLFRLQKDSGWVTIYGMAGSGKSVLASEAVRHHGLIEECF
PGGIHWLPIGQLDKPDLLVKIQSLCFRLEQSLDEKSVYPNSLDEAKERLRFLMLRKYPRS
LLILDDIWDSSVVKVFDIQCRILMTTRNRGIADSVGGFKHEVEVESGLDEKKAMEILALY
TEKKPHTLPEEARGIVRECKGSPLVVSLVGALLKEKPNRWLYYLHQLQQKQFKRIRKSSS
YDYDALDQAMAASIEVLPEDHQDLYKDFTVLEKDVKIPAKVLSVLWDLEPEEVEDILQEF
VNKSLLFVDIHSKPYLYYLHDLQLDFLVEQNREHIESLHTKAVRQYQQHYKDGPSTSGDE
ECLYWIRFLTYHMAKANLSQELYSLMFSLDWVSIKAKIMGPALLINDYVEYGSILDKENS
EVRSQFQEFLSLSAHHLEQRPFPDVLQLALSQPHTSEVYRQARQQAQNRAKRGKLYFDLI
NKSSVENLSRLVIHPHQGSIYSACFSHDGTKVASCGANKMLKVFKSTSGEKLIQIHAHDE
EVLCCAFSPDDRLLATCSSDRRVKVWNAEQGKLLRAFLEEHEEQVNHCEFTNTTQKLLLA
TCSNDEMANVKFWNLNKPASQNTLFGHFEPVKHCCFSPDDSYLSTSSVDGTVKLFQVSTA
NEWKTINVKSVFSDCDNEEVFVKCSTWTADSKRIICATRHVVLVFDVETTDMLLEIKTNR
LGTVQYCHACPTSNLLAIAFSNYTVELWDLEANKKKADCSGHLSWIQRVQFSTDGSQLLS
CSDDQTVRLWETTKVHTSSAVCLKRDSDVLFNDEEIIVSAADNCNRLQVRDGRTGSVLFQ
SEEMSSRIRSTCLCREQSAVGLGHENGTVQVSGLTASQVLRTVGCRIRRLLTPCRGSVLA
VALCSGSVQILEVPSGKLLATLQGHTKTVLHCQFCQSGQTLITSSEDTTIRVWKWQSGEC
KVLQGHKDQVRCFALLSDSTNDLRLLSWSFDDTVKVWDVASGTKLQDLDAHQGAILSCHV
SPDRCLFATTSADKTAKVWSCESWQCEYVLRGHQECVRSCRFSWDGQRLATGDDNGEIRL
WSVKDGSLLKICSRDSKDGMDSLHGGWVTDLHFSPDNSLLVSTGGYIKWWNVVKGETLQT
FYPTGSSLKKIHVSNDFSTFVTIDNIGILYILQRVA
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggtgatggaggaacgggcgcggagctgcctcttgcgccttcgccacaaactggaggag
gacatcaagcccacctatctcatggaccacatgatcagcgatggcgtcatgactgtggaa
gaagaggagaagatcaagacacaatccaccaggaagaatcaagctgccgccctgcttgac
ctcttgctgaggaaggacaatcgttcctacatttctttctacaatgctctggttaaagag
gcatatgatgatttggccaatctgttgcgagctgatctaccttgtgtttcatacggagat
cagaatggctcttctgaccatcatacgccatatgtccagaccatgctaagtgaaggtggg
gtaccacaaaggcctgtagtatttgtcagcagaccagagctgatcaatcgggttcgggag
aaactttttcgcctccagaaagactctggctgggttacaatctatgggatggctggttcg
ggcaagtctgtgcttgcttctgaggctgttagacatcatggactcatcgaagagtgtttt
cctggagggatccactggctgcctattggtcagctggacaaaccagacctgctggtaaag
atccagtcattgtgtttccgcctggagcagagcctggatgaaaagtcagtctaccccaac
tctctggacgaagccaaggagcgtctgcgcttcctcatgttgcgcaagtatccaagatcc
ctactaattcttgatgacatctgggatagctctgtggtgaaagtgtttgatatacaatgc
cggattcttatgaccaccagaaacagaggcatcgctgattctgttggtggtttcaaacat
gaggtggaagtagaaagtggtctggatgagaaaaaggcaatggagatcttggctctgtac
actgaaaaaaagccccacactctgccagaagaagctcgtggtatcgttagagaatgtaaa
ggctctcctttggtggtgtctctagtcggtgctctgctgaaagagaaacccaaccgctgg
ctttattacctccaccagctgcagcagaagcagttcaagcgcatcaggaagtcgtcctct
tacgactacgacgccttggatcaggccatggctgcgagcatcgaggttctgcctgaggac
catcaagatctctacaaagactttaccgtgttggaaaaggacgtcaagatcccagctaag
gtgctgtctgttttgtgggatctggagcctgaggaagtagaggacattctccaggagttt
gtcaacaaatctctgctctttgttgacatccacagtaaaccttatttgtactaccttcat
gacctccagctggattttttggtggagcagaatcgggaacatattgagagccttcacact
aaggcagtgcgtcagtatcagcagcactacaaagacggtccttccacttcaggagacgag
gaatgtctctattggatccgatttttgacctaccacatggccaaagccaacctctcccag
gagctctactcgctcatgttttcactggactgggtcagcatcaaggccaagataatgggt
ccagcactcctcattaatgactacgtggagtatgggtccattcttgacaaagagaacagt
gaagttcgcagtcagttccaggagtttttgtctctgagcgcccaccacctggagcagcgt
cctttccctgatgtccttcagctcgctctgtctcagccacacacctcagaggtctacagg
caggctcgacagcaggcccagaaccgggccaagaggggcaaactctactttgacttgata
aacaagagcagtgtagagaatttgtctcggttagtgatccatcctcaccagggctccatc
tattctgcctgcttctcccatgatggaaccaaagttgcctcttgtggagctaacaagatg
cttaaggtgtttaaaagtacctcaggtgaaaagctcatccaaatccacgcccatgatgaa
gaggtgctttgctgcgccttctcccctgacgaccgtctcctagcaacatgctcaagtgac
aggagggtcaaggtgtggaacgcagaacaaggcaagctgctgagggccttcctggaggag
cacgaggaacaggttaaccactgtgagttcaccaacacgacacagaagctccttctggcc
acctgctccaacgacgaaatggccaacgtcaagttttggaatctcaacaagcccgcctcc
cagaacaccttgtttggccacttcgagccagtgaaacactgctgcttctcccctgatgat
agctacttgtccacttcctccgttgacggaactgttaagttgtttcaggtctcgactgcc
aacgagtggaagacgatcaatgtgaagagcgtgttttctgactgcgacaacgaagaggtt
tttgtcaagtgcagcacctggaccgccgacagcaagcgcatcatttgtgctacgagacat
gttgttttggtatttgatgtggagacaacagacatgctgttggagataaagaccaatcgt
ctgggcacagtgcaatactgtcatgcctgtccgaccagcaacctgctggcaatcgcattc
tcaaactacactgtagagctgtgggaccttgaagccaataagaaaaaggctgactgcagc
ggccacctgagctggattcagcgtgtgcagttttctaccgacggctcccagttgctctcc
tgctcagacgaccagactgtcaggttgtgggagacaacaaaggtccacacgtcttcagcc
gtctgcctgaagagagactcggacgtcctcttcaacgatgaggaaattatagtgtcagct
gcagacaattgcaacagactgcaggtgcgtgacggcagaacgggatcagtgctgttccaa
tcggaggagatgtcgtccaggatcagaagtacctgtctgtgcagggagcagtctgctgtg
ggcctgggccatgaaaatggcaccgtgcaggtgtcaggactgacagctagtcaggtgcta
aggacagttggctgcaggatccggcgcctgctgaccccctgcagggggtcggtgctggca
gtcgctctgtgctcaggcagcgtgcagatcctggaggtgccctccgggaagcttttagcc
actctgcaggggcacactaagaccgtgcttcactgccagttctgccagagtggccaaacg
ctcatcacatcctctgaggacaccaccatcagggtgtggaagtggcagtcaggcgagtgt
aaagtacttcagggacacaaggaccaagtccgatgcttcgctctgctctccgactcaaca
aacgacttgagactgctgtcctggtccttcgatgataccgtgaaggtgtgggacgttgcg
agcggaacaaaactgcaagacctggacgctcatcagggagccattctgtcctgtcacgtc
tcaccagacagatgtctgtttgcgaccacctctgctgacaagaccgctaaggtgtggagc
tgtgaatcctggcagtgtgagtacgtactgagaggccaccaggagtgtgtcagaagctgc
cggttttcctgggacggccagcgcctcgcaacaggagatgacaacggagagattcggctc
tggagtgtcaaagatggctctttactgaagatttgttcccgggacagtaaagacggcatg
gactcgcttcacggaggctgggtgacagatctccacttctcaccagacaactctcttctc
gtctcaaccggaggctacatcaagtggtggaacgtggtgaaaggtgaaaccctccagacg
ttctacccaacagggagctctctgaagaaaatccacgtttccaacgacttctccaccttc
gtcaccatcgacaacattggcatcctgtacatcctccagagggtggcgtga

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